DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LNLFPE
Uniprot ID:
Q8WU79
Source protein:
Stromal membrane-associated protein 2
Source gene:
SMAP2
Class:
LIG_APCC_ABBA_1
Location:
245:250
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.999
ASA_SCORE:
79.2333
COIL:
0.8453
CONS_SCORE:
0.3251
DSS_SCORE:
0.5881
HELIX:
0.126
FCONS_SCORE:
1.1722
RIG_SCORE:
0.7102
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G239C
TCGA-19-1389
GBM
TCGA
LNLFPE
LIG_APCC_ABBA_1
0.1667
p.P256L
DO225106
BRCA
ICGC
LNLFPE
LIG_APCC_ABBA_1
0.1667
p.M255I
DO8192
COAD
ICGC
LNLFPE
LIG_APCC_ABBA_1
0.1944
p.M240V
DO52184
LIHC
ICGC
LNLFPE
LIG_APCC_ABBA_1
0.6389
p.P252T
DO26743
LUSC
ICGC
LNLFPE
LIG_APCC_ABBA_1
0.2778
p.N246K
SIDM00101
Mesothelioma
GDSC
LNLFPE
LIG_APCC_ABBA_1
0.5806
p.N246K
H2591
pleura
COSMIC
LNLFPE
LIG_APCC_ABBA_1
0.5806
p.A235S
SIDM01191
Osteosarcoma
GDSC
LNLFPE
LIG_APCC_ABBA_1
0.0556
p.A235S
U-2-OS
bone
COSMIC
LNLFPE
LIG_APCC_ABBA_1
0.0556
p.M260T
BHY
upper_aerodigestive_tract
COSMIC
LNLFPE
LIG_APCC_ABBA_1
0.1667
p.M260T
YT
haematopoietic_and_lymphoid_tissue
COSMIC
LNLFPE
LIG_APCC_ABBA_1
0.1667
p.M260T
NCI-SNU-5
stomach
COSMIC
LNLFPE
LIG_APCC_ABBA_1
0.1667
p.N241K
H2591
pleura
COSMIC
LNLFPE
LIG_APCC_ABBA_1
0.2222
Drug responses associated with SMAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNLFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WU79
Stromal membrane-associated protein 2
LIG_APCC_ABBA_1
245:250
LNLFPE
APC,CDC20,FZR1
0.999
More...