DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LNLTPASS
Uniprot ID:
Q9P1W3
Source protein:
Calcium permeable stress-gated cation channel 1
Source gene:
TMEM63C
Class:
DEG_SCF_FBW7_1
Location:
752:759
E3 ligase:
FBXW7
DEGRON score:
0.8098
ASA_SCORE:
83.125
COIL:
0.8668
CONS_SCORE:
0.3605
DSS_SCORE:
0.6066
HELIX:
0.1141
FCONS_SCORE:
0.9757
RIG_SCORE:
0.6683
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T764N
TCGA-50-8457
LUAD
TCGA
LNLTPASS
DEG_SCF_FBW7_1
0.1944
p.T764N
DO218927
LUAD
ICGC
LNLTPASS
DEG_SCF_FBW7_1
0.1944
p.A761S
TCGA-A5-A0G1
UCEC
TCGA
LNLTPASS
DEG_SCF_FBW7_1
0.2778
p.A761S
DO42472
UCEC
ICGC
LNLTPASS
DEG_SCF_FBW7_1
0.2778
p.A757T
TCGA-AX-A2HC
UCEC
TCGA
LNLTPASS
DEG_SCF_FBW7_1
0.6028
p.A757T
DO218550
BTCA
ICGC
LNLTPASS
DEG_SCF_FBW7_1
0.6028
p.A757T
DO41572
UCEC
ICGC
LNLTPASS
DEG_SCF_FBW7_1
0.6028
p.S758C
TCGA-B8-A54H
KIRC
TCGA
LNLTPASS
DEG_SCF_FBW7_1
0.643
p.S758C
DO49733
KIRC
ICGC
LNLTPASS
DEG_SCF_FBW7_1
0.643
p.V746L
DO228978
LICA
ICGC
LNLTPASS
DEG_SCF_FBW7_1
0.1667
p.E751K
DO219878
SKCA
ICGC
LNLTPASS
DEG_SCF_FBW7_1
0.3056
p.S759F
DO229446
SKCA
ICGC
LNLTPASS
DEG_SCF_FBW7_1
0.7982
p.R762K
SIDM00422
Hodgkin's Lymphoma
GDSC
LNLTPASS
DEG_SCF_FBW7_1
0.25
p.R762K
ACH-001203
Lymphoma
CCLE
LNLTPASS
DEG_SCF_FBW7_1
0.25
p.R762K
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
LNLTPASS
DEG_SCF_FBW7_1
0.25
p.T745N
SIDM01608
Endometrial Carcinoma
GDSC
LNLTPASS
DEG_SCF_FBW7_1
0.1389
p.T745N
ACH-000990
Endometrial/Uterine Cancer
CCLE
LNLTPASS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with TMEM63C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNLTPASS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P1W3
Calcium permeable stress-gated cation channel 1
DEG_SCF_FBW7_1
752:759
LNLTPASS
FBXW7
0.8098
More...