DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LNPFSE
Uniprot ID:
Q8N0Z2
Source protein:
Actin-binding Rho-activating protein
Source gene:
ABRA
Class:
LIG_APCC_ABBA_1
Location:
262:267
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9933
ASA_SCORE:
75.4167
COIL:
0.818
CONS_SCORE:
0.602
DSS_SCORE:
0.3993
HELIX:
0.1582
FCONS_SCORE:
1.2207
RIG_SCORE:
0.7426
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S266T
TCGA-73-4666
LUAD
TCGA
LNPFSE
LIG_APCC_ABBA_1
0.6005
p.S266T
DO26230
LUAD
ICGC
LNPFSE
LIG_APCC_ABBA_1
0.6005
p.W252C
TCGA-CK-4951
COAD
TCGA
LNPFSE
LIG_APCC_ABBA_1
0.0556
p.W252C
DO10582
COAD
ICGC
LNPFSE
LIG_APCC_ABBA_1
0.0556
p.P264H
TCGA-EE-A2GT
SKCM
TCGA
LNPFSE
LIG_APCC_ABBA_1
0.7694
p.P264H
TCGA-ER-A42K
SKCM
TCGA
LNPFSE
LIG_APCC_ABBA_1
0.7694
p.P264H
DO37946
SKCM
ICGC
LNPFSE
LIG_APCC_ABBA_1
0.7694
p.P264H
DO51252
SKCM
ICGC
LNPFSE
LIG_APCC_ABBA_1
0.7694
p.N263S
DO229473
LAML
ICGC
LNPFSE
LIG_APCC_ABBA_1
0.5958
p.N263S
SIDM00278
Esophageal Squamous Cell Carcinoma
GDSC
LNPFSE
LIG_APCC_ABBA_1
0.5958
p.N263S
SIDM00604
Oral Cavity Carcinoma
GDSC
LNPFSE
LIG_APCC_ABBA_1
0.5958
p.N263S
SIDM00192
Colorectal Carcinoma
GDSC
LNPFSE
LIG_APCC_ABBA_1
0.5958
p.A253D
DO228952
LICA
ICGC
LNPFSE
LIG_APCC_ABBA_1
0.0833
p.A274V
SIDM00683
Prostate Carcinoma
GDSC
LNPFSE
LIG_APCC_ABBA_1
0.1389
p.A274V
ACH-000977
lymph_node
CCLE
LNPFSE
LIG_APCC_ABBA_1
0.1389
p.L273M
SIDM00697
Small Cell Lung Carcinoma
GDSC
LNPFSE
LIG_APCC_ABBA_1
0.1667
p.L273M
ACH-000830
Lung Cancer
CCLE
LNPFSE
LIG_APCC_ABBA_1
0.1667
p.L273M
NCI-H1436
lung
COSMIC
LNPFSE
LIG_APCC_ABBA_1
0.1667
p.D270H
SIDM00932
Kidney Carcinoma
GDSC
LNPFSE
LIG_APCC_ABBA_1
0.25
p.D270H
ACH-000457
Kidney Cancer
CCLE
LNPFSE
LIG_APCC_ABBA_1
0.25
p.D270H
CAL-54
kidney
COSMIC
LNPFSE
LIG_APCC_ABBA_1
0.25
Drug responses associated with ABRA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNPFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N0Z2
Actin-binding Rho-activating protein
LIG_APCC_ABBA_1
262:267
LNPFSE
APC,CDC20,FZR1
0.9933
More...