DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LNPHRE
Uniprot ID:
O75688
Source protein:
Protein phosphatase 1B
Source gene:
PPM1B
Class:
LIG_APCC_ABBA_1
Location:
370:375
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9974
ASA_SCORE:
98.6667
COIL:
0.7422
CONS_SCORE:
0.3409
DSS_SCORE:
0.5474
HELIX:
0.2435
FCONS_SCORE:
1.0578
RIG_SCORE:
0.6598
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S376R
TCGA-85-6798
LUSC
TCGA
LNPHRE
LIG_APCC_ABBA_1
0.75
p.S376R
DO27295
LUSC
ICGC
LNPHRE
LIG_APCC_ABBA_1
0.75
p.D377N
TCGA-90-7769
LUSC
TCGA
LNPHRE
LIG_APCC_ABBA_1
0.2778
p.D377N
DO26822
LUSC
ICGC
LNPHRE
LIG_APCC_ABBA_1
0.2778
p.A365T
TCGA-AP-A051
UCEC
TCGA
LNPHRE
LIG_APCC_ABBA_1
0.1944
p.A365T
DO42673
UCEC
ICGC
LNPHRE
LIG_APCC_ABBA_1
0.1944
p.R360C
TCGA-B5-A3FC
UCEC
TCGA
LNPHRE
LIG_APCC_ABBA_1
0.0556
p.R360C
DO233641
GACA
ICGC
LNPHRE
LIG_APCC_ABBA_1
0.0556
p.R360C
DO41871
UCEC
ICGC
LNPHRE
LIG_APCC_ABBA_1
0.0556
p.R360C
SIDM00487
Colorectal Carcinoma
GDSC
LNPHRE
LIG_APCC_ABBA_1
0.0556
p.R360H
TCGA-C8-A12O
BRCA
TCGA
LNPHRE
LIG_APCC_ABBA_1
0.0556
p.R360H
DO4677
BRCA
ICGC
LNPHRE
LIG_APCC_ABBA_1
0.0556
p.S368N
TCGA-W3-A828
SKCM
TCGA
LNPHRE
LIG_APCC_ABBA_1
0.2778
p.S368N
DO51273
SKCM
ICGC
LNPHRE
LIG_APCC_ABBA_1
0.2778
p.L383V
DO474
BLCA
ICGC
LNPHRE
LIG_APCC_ABBA_1
0.1111
p.L383V
DO49065
HNSC
ICGC
LNPHRE
LIG_APCC_ABBA_1
0.1111
p.V362F
DO228976
LICA
ICGC
LNPHRE
LIG_APCC_ABBA_1
0.1111
p.E375Q
DO35406
PACA
ICGC
LNPHRE
LIG_APCC_ABBA_1
0.6744
p.S368G
SIDM01617
Endometrial Carcinoma
GDSC
LNPHRE
LIG_APCC_ABBA_1
0.2778
p.S368G
ACH-000994
Endometrial/Uterine Cancer
CCLE
LNPHRE
LIG_APCC_ABBA_1
0.2778
p.S376G
SIDM00160
Biliary Tract Carcinoma
GDSC
LNPHRE
LIG_APCC_ABBA_1
0.75
p.S376G
ACH-000377
Bile Duct Cancer
CCLE
LNPHRE
LIG_APCC_ABBA_1
0.75
p.E384D
ACH-001991
Primary
CCLE
LNPHRE
LIG_APCC_ABBA_1
0.0833
Drug responses associated with PPM1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNPHRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75688
Protein phosphatase 1B
LIG_APCC_ABBA_1
370:375
LNPHRE
APC,CDC20,FZR1
0.9974
More...