DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LNPHWE
Uniprot ID:
A1KZ92
Source protein:
Probable oxidoreductase PXDNL
Source gene:
PXDNL
Class:
LIG_APCC_ABBA_1
Location:
988:993
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7285
ASA_SCORE:
78.5833
COIL:
0.8702
CONS_SCORE:
0.5177
DSS_SCORE:
0.2938
HELIX:
0.1267
FCONS_SCORE:
0.8444
RIG_SCORE:
0.7479
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H991N
TCGA-05-4382
LUAD
TCGA
LNPHWE
LIG_APCC_ABBA_1
0.7423
p.H991N
DO24900
LUAD
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.7423
p.V997F
TCGA-22-5472
LUSC
TCGA
LNPHWE
LIG_APCC_ABBA_1
0.2222
p.V997F
DO27421
LUSC
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.2222
p.R1002W
TCGA-CV-A45Z
HNSC
TCGA
LNPHWE
LIG_APCC_ABBA_1
0.0833
p.R1002W
DO52064
HNSC
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.0833
p.T983M
TCGA-D1-A0ZR
UCEC
TCGA
LNPHWE
LIG_APCC_ABBA_1
0.1944
p.T983M
DO40822
UCEC
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.1944
p.G994E
TCGA-D3-A2JO
SKCM
TCGA
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
TCGA-D3-A3MV
SKCM
TCGA
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
TCGA-EE-A2MS
SKCM
TCGA
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
TCGA-EE-A3J5
SKCM
TCGA
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
TCGA-ER-A19K
SKCM
TCGA
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
TCGA-GN-A262
SKCM
TCGA
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
DO37515
SKCM
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
DO37567
SKCM
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
DO37727
SKCM
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
DO47331
SKCM
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
DO47672
SKCM
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
DO47619
SKCM
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994E
ACH-001982
Metastasis
CCLE
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.A987T
TCGA-DM-A0XD
COAD
TCGA
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.A987T
DO10228
COAD
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.A987T
DO35148
PACA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.A987T
DO35315
PACA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.A987T
DO47052
RECA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.A987T
SIDM02029
Colorectal Carcinoma
GDSC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.A987S
DO224852
BRCA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.A987S
DO52550
BRCA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.M981V
DO229010
COCA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.1389
p.M981V
DO229013
COCA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.1389
p.M981V
DO229016
COCA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.1389
p.M981V
DO229003
COCA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.1389
p.M981V
DO229005
COCA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.1389
p.E993D
DO233109
GACA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.5647
p.H978L
DO228278
LICA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.0556
p.E984K
DO222542
MELA
ICGC
LNPHWE
LIG_APCC_ABBA_1
0.2222
p.G994R
SIDM01764
Non-Small Cell Lung Carcinoma
GDSC
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.G994R
ACH-000813
Lung Cancer
CCLE
LNPHWE
LIG_APCC_ABBA_1
0.3056
p.P990L
ACH-000123
Ovarian Cancer
CCLE
LNPHWE
LIG_APCC_ABBA_1
0.6471
p.Q999K
ACH-000248
Breast Cancer
CCLE
LNPHWE
LIG_APCC_ABBA_1
0.1667
p.R1002M
ACH-002027
Endometrial/Uterine Cancer
CCLE
LNPHWE
LIG_APCC_ABBA_1
0.0833
Drug responses associated with PXDNL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNPHWE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1KZ92
Probable oxidoreductase PXDNL
LIG_APCC_ABBA_1
988:993
LNPHWE
APC,CDC20,FZR1
0.7285
More...