DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LNSTPSRS
Uniprot ID:
Q8NCY6
Source protein:
Myb/SANT-like DNA-binding domain-containing protein 4
Source gene:
MSANTD4
Class:
DEG_SCF_FBW7_1
Location:
189:196
E3 ligase:
FBXW7
DEGRON score:
0.991
ASA_SCORE:
73.325
COIL:
0.7996
CONS_SCORE:
0.4944
DSS_SCORE:
0.3969
HELIX:
0.1121
FCONS_SCORE:
0.9013
RIG_SCORE:
0.6591
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D179N
TCGA-AJ-A5DW
UCEC
TCGA
LNSTPSRS
DEG_SCF_FBW7_1
0.0556
p.D179N
DO8264
COAD
ICGC
LNSTPSRS
DEG_SCF_FBW7_1
0.0556
p.D179N
DO50075
UCEC
ICGC
LNSTPSRS
DEG_SCF_FBW7_1
0.0556
p.V205L
TCGA-CR-7371
HNSC
TCGA
LNSTPSRS
DEG_SCF_FBW7_1
0.0833
p.V205L
DO15454
HNSC
ICGC
LNSTPSRS
DEG_SCF_FBW7_1
0.0833
p.T188I
TCGA-D3-A2JH
SKCM
TCGA
LNSTPSRS
DEG_SCF_FBW7_1
0.75
p.T188I
DO47263
SKCM
ICGC
LNSTPSRS
DEG_SCF_FBW7_1
0.75
p.R195I
TCGA-E6-A1M0
UCEC
TCGA
LNSTPSRS
DEG_SCF_FBW7_1
0.6991
p.R195I
DO43682
UCEC
ICGC
LNSTPSRS
DEG_SCF_FBW7_1
0.6991
p.H182D
TCGA-RW-A685
PCPG
TCGA
LNSTPSRS
DEG_SCF_FBW7_1
0.1389
p.L203F
DO233945
GACA
ICGC
LNSTPSRS
DEG_SCF_FBW7_1
0.1389
p.V205I
SIDM00957
Colorectal Carcinoma
GDSC
LNSTPSRS
DEG_SCF_FBW7_1
0.0833
p.N206D
SIDM00556
Neuroblastoma
GDSC
LNSTPSRS
DEG_SCF_FBW7_1
0.0556
p.N206D
ACH-000227
Neuroblastoma
CCLE
LNSTPSRS
DEG_SCF_FBW7_1
0.0556
p.N206D
KP-N-YN
autonomic_ganglia
COSMIC
LNSTPSRS
DEG_SCF_FBW7_1
0.0556
p.F186V
SIDM00214
Colorectal Carcinoma
GDSC
LNSTPSRS
DEG_SCF_FBW7_1
0.25
p.F186V
ACH-000955
Colon/Colorectal Cancer
CCLE
LNSTPSRS
DEG_SCF_FBW7_1
0.25
p.F186V
SNU-407
large_intestine
COSMIC
LNSTPSRS
DEG_SCF_FBW7_1
0.25
p.F180L
SIDM00982
Glioblastoma
GDSC
LNSTPSRS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with MSANTD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNSTPSRS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NCY6
Myb/SANT-like DNA-binding domain-containing protein 4
DEG_SCF_FBW7_1
189:196
LNSTPSRS
FBXW7
0.991
More...