DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LNTPLPE
Uniprot ID:
Q9NZA1
Source protein:
Chloride intracellular channel protein 5
Source gene:
CLIC5
Class:
DEG_SCF_FBW7_2
Location:
311:317
E3 ligase:
FBXW7
DEGRON score:
0.8775
ASA_SCORE:
61.7571
COIL:
0.6736
CONS_SCORE:
0.4014
DSS_SCORE:
0.3788
HELIX:
0.3054
FCONS_SCORE:
1.0414
RIG_SCORE:
0.7524
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P314R
TCGA-06-2561
GBM
TCGA
LNTPLPE
DEG_SCF_FBW7_2
0.7512
p.T301S
TCGA-96-A4JK
LUSC
TCGA
LNTPLPE
DEG_SCF_FBW7_2
0.0556
p.A321T
TCGA-MQ-A6BL
MESO
TCGA
LNTPLPE
DEG_SCF_FBW7_2
0.2222
p.T323S
SIDM00232
Kidney Carcinoma
GDSC
LNTPLPE
DEG_SCF_FBW7_2
0.1667
p.T323S
SIDM00075
Non-Cancerous
GDSC
LNTPLPE
DEG_SCF_FBW7_2
0.1667
p.T323S
SIDM00589
Oral Cavity Carcinoma
GDSC
LNTPLPE
DEG_SCF_FBW7_2
0.1667
p.T323S
NCC021
kidney
COSMIC
LNTPLPE
DEG_SCF_FBW7_2
0.1667
p.T323S
HSC-3
upper_aerodigestive_tract
COSMIC
LNTPLPE
DEG_SCF_FBW7_2
0.1667
p.E318D
SIDM00915
Small Cell Lung Carcinoma
GDSC
LNTPLPE
DEG_SCF_FBW7_2
0.3056
p.E318D
SIDM01107
Melanoma
GDSC
LNTPLPE
DEG_SCF_FBW7_2
0.3056
p.E318D
SIDM01759
Hodgkin's Lymphoma
GDSC
LNTPLPE
DEG_SCF_FBW7_2
0.3056
p.K302E
SIDM01028
Esophageal Squamous Cell Carcinoma
GDSC
LNTPLPE
DEG_SCF_FBW7_2
0.1944
p.K302E
KYSE-410
oesophagus
COSMIC
LNTPLPE
DEG_SCF_FBW7_2
0.1944
Drug responses associated with CLIC5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNTPLPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NZA1
Chloride intracellular channel protein 5
DEG_SCF_FBW7_2
311:317
LNTPLPE
FBXW7
0.8775
More...