DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPAADVSPA
Uniprot ID:
O43149
Source protein:
Zinc finger ZZ-type and EF-hand domain-containing protein 1
Source gene:
ZZEF1
Class:
DEG_SIAH_1
Location:
1503:1511
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.7381
ASA_SCORE:
66.6556
COIL:
0.7512
CONS_SCORE:
0.2473
DSS_SCORE:
0.6979
HELIX:
0.1826
FCONS_SCORE:
0.8447
RIG_SCORE:
0.5899
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K1496R
TCGA-28-2506
GBM
TCGA
LPAADVSPA
DEG_SIAH_1
0.25
p.K1496R
DO11585
GBM
ICGC
LPAADVSPA
DEG_SIAH_1
0.25
p.S1499F
TCGA-66-2756
LUSC
TCGA
LPAADVSPA
DEG_SIAH_1
0.6667
p.S1499F
DO27128
LUSC
ICGC
LPAADVSPA
DEG_SIAH_1
0.6667
p.A1513T
TCGA-BR-8078
STAD
TCGA
LPAADVSPA
DEG_SIAH_1
0.2778
p.A1513T
DO38288
STAD
ICGC
LPAADVSPA
DEG_SIAH_1
0.2778
p.E1514D
TCGA-D9-A6EC
SKCM
TCGA
LPAADVSPA
DEG_SIAH_1
0.25
p.E1514D
DO50291
SKCM
ICGC
LPAADVSPA
DEG_SIAH_1
0.25
p.A1513V
TCGA-DF-A2KU
UCEC
TCGA
LPAADVSPA
DEG_SIAH_1
0.2778
p.A1513V
DO223286
UCEC
ICGC
LPAADVSPA
DEG_SIAH_1
0.2778
p.P1498Q
DO229028
LICA
ICGC
LPAADVSPA
DEG_SIAH_1
0.1944
p.S1499P
DO220841
MELA
ICGC
LPAADVSPA
DEG_SIAH_1
0.6667
Drug responses associated with ZZEF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPAADVSPA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43149
Zinc finger ZZ-type and EF-hand domain-containing protein 1
DEG_SIAH_1
1503:1511
LPAADVSPA
SIAH1,SIAH2,SIAH3
0.7381
More...