DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPAASVAPK
Uniprot ID:
Q96ST8
Source protein:
Centrosomal protein of 89 kDa
Source gene:
CEP89
Class:
DEG_SIAH_1
Location:
21:29
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.8144
ASA_SCORE:
56.2778
COIL:
0.6072
CONS_SCORE:
0.3526
DSS_SCORE:
0.4513
HELIX:
0.2823
FCONS_SCORE:
0.8605
RIG_SCORE:
0.6723
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I16T
TCGA-06-5416
GBM
TCGA
LPAASVAPK
DEG_SIAH_1
0.1944
p.I16T
DO10880
GBM
ICGC
LPAASVAPK
DEG_SIAH_1
0.1944
p.P22S
TCGA-77-A5G6
LUSC
TCGA
LPAASVAPK
DEG_SIAH_1
0.6752
p.P22S
DO50097
LUSC
ICGC
LPAASVAPK
DEG_SIAH_1
0.6752
p.R34H
TCGA-AA-3811
COAD
TCGA
LPAASVAPK
DEG_SIAH_1
0.1944
p.R34H
DO7962
COAD
ICGC
LPAASVAPK
DEG_SIAH_1
0.1944
p.R39H
TCGA-AJ-A3OK
UCEC
TCGA
LPAASVAPK
DEG_SIAH_1
0.0556
p.R39H
DO43602
UCEC
ICGC
LPAASVAPK
DEG_SIAH_1
0.0556
p.R39H
SIDM00683
Prostate Carcinoma
GDSC
LPAASVAPK
DEG_SIAH_1
0.0556
p.R39H
LNCaP-Clone-FGC
prostate
COSMIC
LPAASVAPK
DEG_SIAH_1
0.0556
p.F13V
TCGA-B5-A1MX
UCEC
TCGA
LPAASVAPK
DEG_SIAH_1
0.1111
p.F13V
DO41999
UCEC
ICGC
LPAASVAPK
DEG_SIAH_1
0.1111
p.P37S
TCGA-D3-A5GO
SKCM
TCGA
LPAASVAPK
DEG_SIAH_1
0.1111
p.P37S
DO47419
SKCM
ICGC
LPAASVAPK
DEG_SIAH_1
0.1111
p.G19C
TCGA-ER-A19H
SKCM
TCGA
LPAASVAPK
DEG_SIAH_1
0.2778
p.G19C
DO47299
SKCM
ICGC
LPAASVAPK
DEG_SIAH_1
0.2778
p.P37A
TCGA-XF-AAMG
BLCA
TCGA
LPAASVAPK
DEG_SIAH_1
0.1111
p.P37A
DO219049
BLCA
ICGC
LPAASVAPK
DEG_SIAH_1
0.1111
p.S25N
DO234352
ESAD
ICGC
LPAASVAPK
DEG_SIAH_1
0.5958
p.H18Y
DO233867
GACA
ICGC
LPAASVAPK
DEG_SIAH_1
0.25
p.P38L
DO231992
LICA
ICGC
LPAASVAPK
DEG_SIAH_1
0.0833
p.H15N
DO229022
LICA
ICGC
LPAASVAPK
DEG_SIAH_1
0.1667
p.H15N
DO229041
LICA
ICGC
LPAASVAPK
DEG_SIAH_1
0.1667
p.P22L
SIDM00684
Glioblastoma
GDSC
LPAASVAPK
DEG_SIAH_1
0.7582
p.P22L
ACH-000595
Brain Cancer
CCLE
LPAASVAPK
DEG_SIAH_1
0.7582
p.P22L
LN-229
central_nervous_system
COSMIC
LPAASVAPK
DEG_SIAH_1
0.7582
p.K29R
ACH-000973
Bladder Cancer
CCLE
LPAASVAPK
DEG_SIAH_1
0.6126
p.K29R
639-V
urinary_tract
COSMIC
LPAASVAPK
DEG_SIAH_1
0.6126
p.A30T
ACH-002509
Skin Cancer
CCLE
LPAASVAPK
DEG_SIAH_1
0.3056
Drug responses associated with CEP89 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPAASVAPK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96ST8
Centrosomal protein of 89 kDa
DEG_SIAH_1
21:29
LPAASVAPK
SIAH1,SIAH2,SIAH3
0.8144
More...