DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPATPPAT
Uniprot ID:
Q9H211
Source protein:
DNA replication factor Cdt1
Source gene:
CDT1
Class:
DEG_SCF_FBW7_1
Location:
399:406
E3 ligase:
FBXW7
DEGRON score:
0.9573
ASA_SCORE:
88.5625
COIL:
0.9636
CONS_SCORE:
0.3365
DSS_SCORE:
0.7581
HELIX:
0.0102
FCONS_SCORE:
0.8287
RIG_SCORE:
0.5419
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P395T
TCGA-AB-2849
LAML
TCGA
LPATPPAT
DEG_SCF_FBW7_1
0.2222
p.P395T
DO21403
LAML
ICGC
LPATPPAT
DEG_SCF_FBW7_1
0.2222
p.A409T
TCGA-EO-A22U
UCEC
TCGA
LPATPPAT
DEG_SCF_FBW7_1
0.25
p.A409T
DO43755
UCEC
ICGC
LPATPPAT
DEG_SCF_FBW7_1
0.25
p.P404A
TCGA-UY-A9PB
BLCA
TCGA
LPATPPAT
DEG_SCF_FBW7_1
0.6392
p.P404A
DO219041
BLCA
ICGC
LPATPPAT
DEG_SCF_FBW7_1
0.6392
p.T406P
DO48360
BLCA
ICGC
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T406P
DO229453
SKCA
ICGC
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.P389H
DO233941
GACA
ICGC
LPATPPAT
DEG_SCF_FBW7_1
0.0556
p.A405S
DO229006
LICA
ICGC
LPATPPAT
DEG_SCF_FBW7_1
0.6477
p.R396K
SIDM00251
Gastric Carcinoma
GDSC
LPATPPAT
DEG_SCF_FBW7_1
0.25
p.R396K
ACH-000949
Gastric Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.25
p.R396K
TGBC11TKB
stomach
COSMIC
LPATPPAT
DEG_SCF_FBW7_1
0.25
p.P395S
SIDM01510
Non-Small Cell Lung Carcinoma
GDSC
LPATPPAT
DEG_SCF_FBW7_1
0.2222
p.P395S
ACH-000925
Lung Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.2222
p.T402P
ACH-000108
Pancreatic Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000155
Pancreatic Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000190
Unknown
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000197
Leukemia
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000207
Head and Neck Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000308
Ovarian Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000472
Head and Neck Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000727
Lung Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000786
Lymphoma
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000802
Bladder Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000832
Head and Neck Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000960
Leukemia
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-000986
Colon/Colorectal Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-001125
Brain Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-001364
Lung Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002090
Kidney Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002117
Bone Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002156
Lung Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002200
Skin Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002209
Leukemia
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002213
Head and Neck Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002215
Lymphoma
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002220
Lymphoma
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002232
Lymphoma
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002234
Head and Neck Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002235
Bladder Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002236
Lymphoma
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002261
Neuroblastoma
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002262
Leukemia
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002280
Neuroblastoma
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002288
Embryonal Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002312
Gallbladder Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002344
Non-Cancerous
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002345
Colon/Colorectal Cancer
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002354
Non-Cancerous
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002357
Non-Cancerous
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002361
Non-Cancerous
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002369
Non-Cancerous
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
p.T402P
ACH-002371
Non-Cancerous
CCLE
LPATPPAT
DEG_SCF_FBW7_1
0.8142
Drug responses associated with CDT1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPATPPAT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H211
DNA replication factor Cdt1
DEG_SCF_FBW7_1
399:406
LPATPPAT
FBXW7
0.9573
More...