DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPGTPGNE
Uniprot ID:
Q01955
Source protein:
Collagen alpha-3
Source gene:
COL4A3
Class:
DEG_SCF_FBW7_2
Location:
778:785
E3 ligase:
FBXW7
DEGRON score:
0.9896
ASA_SCORE:
75.2625
COIL:
0.9436
CONS_SCORE:
0.5607
DSS_SCORE:
0.8495
HELIX:
0.0134
FCONS_SCORE:
1.0338
RIG_SCORE:
0.5177
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R791Q
TCGA-06-5416
GBM
TCGA
LPGTPGNE
DEG_SCF_FBW7_2
0.1667
p.R791Q
TCGA-14-1795
GBM
TCGA
LPGTPGNE
DEG_SCF_FBW7_2
0.1667
p.R791Q
TCGA-XF-A9SG
BLCA
TCGA
LPGTPGNE
DEG_SCF_FBW7_2
0.1667
p.R791Q
DO51912
BLCA
ICGC
LPGTPGNE
DEG_SCF_FBW7_2
0.1667
p.R791Q
DO13114
GBM
ICGC
LPGTPGNE
DEG_SCF_FBW7_2
0.1667
p.R791Q
DO10880
GBM
ICGC
LPGTPGNE
DEG_SCF_FBW7_2
0.1667
p.G768E
TCGA-61-1998
OV
TCGA
LPGTPGNE
DEG_SCF_FBW7_2
0.0556
p.G768E
DO28813
OV
ICGC
LPGTPGNE
DEG_SCF_FBW7_2
0.0556
p.L787F
TCGA-B5-A0JY
UCEC
TCGA
LPGTPGNE
DEG_SCF_FBW7_2
0.2778
p.L787F
DO43041
UCEC
ICGC
LPGTPGNE
DEG_SCF_FBW7_2
0.2778
p.G780V
TCGA-J7-6720
KIRP
TCGA
LPGTPGNE
DEG_SCF_FBW7_2
0.6421
p.G780V
DO20855
KIRP
ICGC
LPGTPGNE
DEG_SCF_FBW7_2
0.6421
p.G789V
DO229008
LICA
ICGC
LPGTPGNE
DEG_SCF_FBW7_2
0.2222
p.G783E
DO222396
MELA
ICGC
LPGTPGNE
DEG_SCF_FBW7_2
0.6087
p.G783E
SIDM00007
Other Solid Cancers
GDSC
LPGTPGNE
DEG_SCF_FBW7_2
0.6087
p.G783E
ACH-001550
Skin Cancer
CCLE
LPGTPGNE
DEG_SCF_FBW7_2
0.6087
p.G783E
MCC13
skin
COSMIC
LPGTPGNE
DEG_SCF_FBW7_2
0.6087
p.L787P
SIDM00370
T-Lymphoblastic Leukemia
GDSC
LPGTPGNE
DEG_SCF_FBW7_2
0.2778
p.L787P
ACH-000197
Leukemia
CCLE
LPGTPGNE
DEG_SCF_FBW7_2
0.2778
p.L787P
TALL-1
haematopoietic_and_lymphoid_tissue
COSMIC
LPGTPGNE
DEG_SCF_FBW7_2
0.2778
p.G789R
SIDM00221
Melanoma
GDSC
LPGTPGNE
DEG_SCF_FBW7_2
0.2222
p.G789R
ACH-002388
Skin Cancer
CCLE
LPGTPGNE
DEG_SCF_FBW7_2
0.2222
p.P779T
SIDM00145
T-Lymphoblastic Leukemia
GDSC
LPGTPGNE
DEG_SCF_FBW7_2
0.5919
p.P779T
ACH-001127
Leukemia
CCLE
LPGTPGNE
DEG_SCF_FBW7_2
0.5919
p.P779T
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
LPGTPGNE
DEG_SCF_FBW7_2
0.5919
p.G771E
ACH-001415
Bladder Cancer
CCLE
LPGTPGNE
DEG_SCF_FBW7_2
0.1389
Drug responses associated with COL4A3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPGTPGNE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q01955
Collagen alpha-3
DEG_SCF_FBW7_2
778:785
LPGTPGNE
FBXW7
0.9896
More...