DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPGTPGNT
Uniprot ID:
Q01955
Source protein:
Collagen alpha-3
Source gene:
COL4A3
Class:
DEG_SCF_FBW7_1
Location:
107:114
E3 ligase:
FBXW7
DEGRON score:
0.9902
ASA_SCORE:
71.3
COIL:
0.9334
CONS_SCORE:
0.5553
DSS_SCORE:
0.5513
HELIX:
0.0116
FCONS_SCORE:
0.9034
RIG_SCORE:
0.5716
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G112D
TCGA-19-5956
GBM
TCGA
LPGTPGNT
DEG_SCF_FBW7_1
0.6087
p.G112D
DO13863
GBM
ICGC
LPGTPGNT
DEG_SCF_FBW7_1
0.6087
p.G97R
TCGA-86-8585
LUAD
TCGA
LPGTPGNT
DEG_SCF_FBW7_1
0.0556
p.G97R
DO24850
LUAD
ICGC
LPGTPGNT
DEG_SCF_FBW7_1
0.0556
p.G100R
TCGA-Z2-A8RT
SKCM
TCGA
LPGTPGNT
DEG_SCF_FBW7_1
0.1389
p.G100R
DO51301
SKCM
ICGC
LPGTPGNT
DEG_SCF_FBW7_1
0.1389
p.G115V
DO224717
BRCA
ICGC
LPGTPGNT
DEG_SCF_FBW7_1
0.3056
p.G121C
DO229022
LICA
ICGC
LPGTPGNT
DEG_SCF_FBW7_1
0.1389
p.G100E
DO220894
MELA
ICGC
LPGTPGNT
DEG_SCF_FBW7_1
0.1389
p.G106E
DO229232
THCA
ICGC
LPGTPGNT
DEG_SCF_FBW7_1
0.3056
p.F101S
SIDM01450
Gastric Carcinoma
GDSC
LPGTPGNT
DEG_SCF_FBW7_1
0.1667
p.F101S
ACH-000898
Gastric Cancer
CCLE
LPGTPGNT
DEG_SCF_FBW7_1
0.1667
Drug responses associated with COL4A3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPGTPGNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q01955
Collagen alpha-3
DEG_SCF_FBW7_1
107:114
LPGTPGNT
FBXW7
0.9902
More...