DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPGTPGPT
Uniprot ID:
P02462
Source protein:
Collagen alpha-1
Source gene:
COL4A1
Class:
DEG_SCF_FBW7_1
Location:
1137:1144
E3 ligase:
FBXW7
DEGRON score:
0.9744
ASA_SCORE:
70.3375
COIL:
0.9426
CONS_SCORE:
0.7033
DSS_SCORE:
0.7935
HELIX:
0.0079
FCONS_SCORE:
0.9872
RIG_SCORE:
0.5371
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1129H
TCGA-95-7567
LUAD
TCGA
LPGTPGPT
DEG_SCF_FBW7_1
0.1111
p.P1129H
DO25564
LUAD
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.1111
p.P1138S
TCGA-99-8025
LUAD
TCGA
LPGTPGPT
DEG_SCF_FBW7_1
0.5641
p.P1138S
DO24255
LUAD
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.5641
p.G1142D
TCGA-BG-A222
UCEC
TCGA
LPGTPGPT
DEG_SCF_FBW7_1
0.6087
p.G1142D
DO42977
UCEC
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.6087
p.P1138H
TCGA-EO-A22U
UCEC
TCGA
LPGTPGPT
DEG_SCF_FBW7_1
0.6583
p.P1138H
DO43755
UCEC
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.6583
p.P1138H
SIDM00238
Ovarian Carcinoma
GDSC
LPGTPGPT
DEG_SCF_FBW7_1
0.6583
p.P1138H
ACH-000947
Ovarian Cancer
CCLE
LPGTPGPT
DEG_SCF_FBW7_1
0.6583
p.P1138H
OVK-18
ovary
COSMIC
LPGTPGPT
DEG_SCF_FBW7_1
0.6583
p.P1143H
TCGA-ER-A19N
SKCM
TCGA
LPGTPGPT
DEG_SCF_FBW7_1
0.6583
p.P1143H
DO37452
SKCM
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.6583
p.K1132R
TCGA-EY-A3QX
UCEC
TCGA
LPGTPGPT
DEG_SCF_FBW7_1
0.3056
p.K1132R
DO48176
UCEC
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.3056
p.E1152K
TCGA-FW-A3R5
SKCM
TCGA
LPGTPGPT
DEG_SCF_FBW7_1
0.1111
p.E1152K
DO37406
SKCM
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.1111
p.G1133E
TCGA-FW-A3R5
SKCM
TCGA
LPGTPGPT
DEG_SCF_FBW7_1
0.2222
p.G1133E
DO222644
MELA
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.2222
p.G1133E
DO37406
SKCM
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.2222
p.P1141L
DO233760
GACA
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.7582
p.G1139E
DO222843
MELA
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.6087
p.A1135V
DO229259
THCA
ICGC
LPGTPGPT
DEG_SCF_FBW7_1
0.2778
p.T1144R
SIDM00192
Colorectal Carcinoma
GDSC
LPGTPGPT
DEG_SCF_FBW7_1
0.7876
p.T1144R
SIDM01728
Endometrial Carcinoma
GDSC
LPGTPGPT
DEG_SCF_FBW7_1
0.7876
p.T1144R
SIDM01463
Endometrial Carcinoma
GDSC
LPGTPGPT
DEG_SCF_FBW7_1
0.7876
p.T1144R
SIDM01694
B-Lymphoblastic Leukemia
GDSC
LPGTPGPT
DEG_SCF_FBW7_1
0.7876
Drug responses associated with COL4A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPGTPGPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P02462
Collagen alpha-1
DEG_SCF_FBW7_1
1137:1144
LPGTPGPT
FBXW7
0.9744
More...