DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LPLFPE
Uniprot ID:
Q14957
Source protein:
Glutamate receptor ionotropic, NMDA 2C
Source gene:
GRIN2C
Class:
LIG_APCC_ABBA_1
Location:
1043:1048
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7111
ASA_SCORE:
70.4
COIL:
0.8665
CONS_SCORE:
0.2609
DSS_SCORE:
0.303
HELIX:
0.041
FCONS_SCORE:
0.913
RIG_SCORE:
0.78
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1034Q
DO222708
MELA
ICGC
LPLFPE
LIG_APCC_ABBA_1
0.0833
p.S1038A
SIDM00931
Thyroid Gland Carcinoma
GDSC
LPLFPE
LIG_APCC_ABBA_1
0.1944
p.G1039D
ACH-000985
Colon/Colorectal Cancer
CCLE
LPLFPE
LIG_APCC_ABBA_1
0.2222
Drug responses associated with GRIN2C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPLFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14957
Glutamate receptor ionotropic, NMDA 2C
LIG_APCC_ABBA_1
1043:1048
LPLFPE
APC,CDC20,FZR1
0.7111
More...