DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPLFRD
Uniprot ID:
Q8NBT3
Source protein:
Transmembrane protein 145
Source gene:
TMEM145
Class:
LIG_APCC_ABBA_1
Location:
478:483
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7263
ASA_SCORE:
89.2833
COIL:
0.8012
CONS_SCORE:
0.2204
DSS_SCORE:
0.5716
HELIX:
0.1542
FCONS_SCORE:
1.0116
RIG_SCORE:
0.7219
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R482L
TCGA-21-1077
LUSC
TCGA
LPLFRD
LIG_APCC_ABBA_1
0.7316
p.R482L
DO26725
LUSC
ICGC
LPLFRD
LIG_APCC_ABBA_1
0.7316
p.R471Q
TCGA-4Z-AA7M
BLCA
TCGA
LPLFRD
LIG_APCC_ABBA_1
0.1389
p.R471Q
DO218976
BLCA
ICGC
LPLFRD
LIG_APCC_ABBA_1
0.1389
p.R482H
TCGA-BR-8078
STAD
TCGA
LPLFRD
LIG_APCC_ABBA_1
0.7133
p.R482H
DO38288
STAD
ICGC
LPLFRD
LIG_APCC_ABBA_1
0.7133
p.R491G
TCGA-DK-A3WW
BLCA
TCGA
LPLFRD
LIG_APCC_ABBA_1
0.1111
p.R491G
DO481
BLCA
ICGC
LPLFRD
LIG_APCC_ABBA_1
0.1111
p.S476F
TCGA-EO-A22R
UCEC
TCGA
LPLFRD
LIG_APCC_ABBA_1
0.2778
p.S476F
DO42713
UCEC
ICGC
LPLFRD
LIG_APCC_ABBA_1
0.2778
p.P487H
TCGA-FS-A1ZB
SKCM
TCGA
LPLFRD
LIG_APCC_ABBA_1
0.2222
p.P487H
DO37886
SKCM
ICGC
LPLFRD
LIG_APCC_ABBA_1
0.2222
p.R485W
TCGA-OD-A75X
SKCM
TCGA
LPLFRD
LIG_APCC_ABBA_1
0.2778
p.R485W
DO48601
SKCM
ICGC
LPLFRD
LIG_APCC_ABBA_1
0.2778
p.V479A
DO42256
UCEC
ICGC
LPLFRD
LIG_APCC_ABBA_1
0.6936
Drug responses associated with TMEM145 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPLFRD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NBT3
Transmembrane protein 145
LIG_APCC_ABBA_1
478:483
LPLFRD
APC,CDC20,FZR1
0.7263
More...