DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
LPLHSE
Uniprot ID:
P13611
Source protein:
Versican core protein
Source gene:
VCAN
Class:
LIG_APCC_ABBA_1
Location:
2489:2494
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5237
ASA_SCORE:
93.7833
COIL:
0.8388
CONS_SCORE:
0.3687
DSS_SCORE:
0.5888
HELIX:
0.0268
FCONS_SCORE:
0.8581
RIG_SCORE:
0.7089
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2498N
TCGA-AX-A05Z
UCEC
TCGA
LPLHSE
LIG_APCC_ABBA_1
0.2222
p.S2498N
DO40884
UCEC
ICGC
LPLHSE
LIG_APCC_ABBA_1
0.2222
p.E2494K
TCGA-CV-7568
HNSC
TCGA
LPLHSE
LIG_APCC_ABBA_1
0.7022
p.E2494K
DO14160
HNSC
ICGC
LPLHSE
LIG_APCC_ABBA_1
0.7022
p.T2503A
TCGA-DM-A1DA
COAD
TCGA
LPLHSE
LIG_APCC_ABBA_1
0.0833
p.T2503A
DO7852
COAD
ICGC
LPLHSE
LIG_APCC_ABBA_1
0.0833
p.S2486L
TCGA-EO-A22X
UCEC
TCGA
LPLHSE
LIG_APCC_ABBA_1
0.25
p.S2486L
DO43907
UCEC
ICGC
LPLHSE
LIG_APCC_ABBA_1
0.25
p.N2496D
TCGA-HU-8602
STAD
TCGA
LPLHSE
LIG_APCC_ABBA_1
0.2778
p.N2496D
DO47829
STAD
ICGC
LPLHSE
LIG_APCC_ABBA_1
0.2778
p.S2504N
SIDM01169
Ovarian Carcinoma
GDSC
LPLHSE
LIG_APCC_ABBA_1
0.0556
p.S2504N
ACH-000885
Ovarian Cancer
CCLE
LPLHSE
LIG_APCC_ABBA_1
0.0556
p.S2504N
TOV-21G
ovary
COSMIC
LPLHSE
LIG_APCC_ABBA_1
0.0556
p.S2498I
SIDM01113
Other Sarcomas
GDSC
LPLHSE
LIG_APCC_ABBA_1
0.2222
p.S2498I
SK-UT-1
soft_tissue
COSMIC
LPLHSE
LIG_APCC_ABBA_1
0.2222
Drug responses associated with VCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPLHSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
LIG_APCC_ABBA_1
2489:2494
LPLHSE
APC,CDC20,FZR1
0.5237
More...