DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LPLYFE
Uniprot ID:
Q9ULZ2
Source protein:
Signal-transducing adaptor protein 1
Source gene:
STAP1
Class:
LIG_APCC_ABBA_1
Location:
24:29
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8499
ASA_SCORE:
47.7
COIL:
0.5002
CONS_SCORE:
0.8507
DSS_SCORE:
0.021
HELIX:
0.0112
FCONS_SCORE:
1.1918
RIG_SCORE:
0.9255
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L24I
TCGA-2Z-A9J8
KIRP
TCGA
LPLYFE
LIG_APCC_ABBA_1
0.6063
p.L24I
DO219660
KIRP
ICGC
LPLYFE
LIG_APCC_ABBA_1
0.6063
p.K20N
TCGA-A5-A0G1
UCEC
TCGA
LPLYFE
LIG_APCC_ABBA_1
0.3333
p.K20N
DO42472
UCEC
ICGC
LPLYFE
LIG_APCC_ABBA_1
0.3333
p.A23D
TCGA-A5-A0G1
UCEC
TCGA
LPLYFE
LIG_APCC_ABBA_1
0.3056
p.A23D
DO42472
UCEC
ICGC
LPLYFE
LIG_APCC_ABBA_1
0.3056
p.E17K
TCGA-D3-A3ML
SKCM
TCGA
LPLYFE
LIG_APCC_ABBA_1
0.1389
p.E17K
DO47413
SKCM
ICGC
LPLYFE
LIG_APCC_ABBA_1
0.1389
p.G38E
TCGA-FW-A3R5
SKCM
TCGA
LPLYFE
LIG_APCC_ABBA_1
0.0833
p.G38E
DO37406
SKCM
ICGC
LPLYFE
LIG_APCC_ABBA_1
0.0833
p.R36Q
DO871
BOCA
ICGC
LPLYFE
LIG_APCC_ABBA_1
0.1389
p.I14F
DO233739
GACA
ICGC
LPLYFE
LIG_APCC_ABBA_1
0.0556
p.A23S
DO229025
LICA
ICGC
LPLYFE
LIG_APCC_ABBA_1
0.3056
p.I34M
SIDM00806
Osteosarcoma
GDSC
LPLYFE
LIG_APCC_ABBA_1
0.1944
p.I34M
HOS
bone
COSMIC
LPLYFE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with STAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPLYFE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9ULZ2
Signal-transducing adaptor protein 1
LIG_APCC_ABBA_1
24:29
LPLYFE
APC,CDC20,FZR1
0.8499
More...