DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LPLYGD
Uniprot ID:
O15085
Source protein:
Rho guanine nucleotide exchange factor 11
Source gene:
ARHGEF11
Class:
LIG_APCC_ABBA_1
Location:
197:202
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6003
ASA_SCORE:
85.7333
COIL:
0.522
CONS_SCORE:
0.3216
DSS_SCORE:
0.6209
HELIX:
0.4622
FCONS_SCORE:
0.8521
RIG_SCORE:
0.7345
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R202W
TCGA-BR-6452
STAD
TCGA
LPLYGD
LIG_APCC_ABBA_1
0.8634
p.R202W
DO219873
SKCA
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.8634
p.R202W
DO38404
STAD
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.8634
p.S201R
DO228974
LICA
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.7427
p.S201R
DO32831
PACA
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.7427
p.R202Q
SIDM00363
Acute Myeloid Leukemia
GDSC
LPLYGD
LIG_APCC_ABBA_1
0.7329
p.R202Q
P31-FUJ
haematopoietic_and_lymphoid_tissue
COSMIC
LPLYGD
LIG_APCC_ABBA_1
0.7329
p.D202G
DO51705
PAAD
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.7198
p.T203N
DO229024
LICA
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.3056
p.P196L
DO42280
UCEC
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.3056
p.R195S
DO229028
LICA
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.2778
p.R195C
SIDM00958
Chronic Myelogenous Leukemia
GDSC
LPLYGD
LIG_APCC_ABBA_1
0.2778
p.R195C
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
LPLYGD
LIG_APCC_ABBA_1
0.2778
p.L194F
DO219460
SKCM
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.25
p.A205T
SIDM01007
T-Lymphoblastic Leukemia
GDSC
LPLYGD
LIG_APCC_ABBA_1
0.25
p.R206S
DO33032
PACA
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.2222
p.S207F
DO8898
COAD
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.1944
p.S207F
DO37835
SKCM
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.1944
p.P207L
DO41331
UCEC
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.1944
p.E209Q
H513
pleura
COSMIC
LPLYGD
LIG_APCC_ABBA_1
0.1389
p.E210A
ACH-001450
Lymphoma
CCLE
LPLYGD
LIG_APCC_ABBA_1
0.1111
p.R188Q
DO234462
ESAD
ICGC
LPLYGD
LIG_APCC_ABBA_1
0.0833
p.R211Q
WIL2-NS
haematopoietic_and_lymphoid_tissue
COSMIC
LPLYGD
LIG_APCC_ABBA_1
0.0833
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Drug responses associated with ARHGEF11 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LPLYGD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15085
Rho guanine nucleotide exchange factor 11
LIG_APCC_ABBA_1
197:202
LPLYGD
APC,CDC20,FZR1
0.6003
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