DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPMTPILE
Uniprot ID:
Q8IZ21
Source protein:
Phosphatase and actin regulator 4
Source gene:
PHACTR4
Class:
DEG_SCF_FBW7_2
Location:
429:436
E3 ligase:
FBXW7
DEGRON score:
0.9924
ASA_SCORE:
89.15
COIL:
0.9365
CONS_SCORE:
0.4086
DSS_SCORE:
0.4497
HELIX:
0.0326
FCONS_SCORE:
1.1163
RIG_SCORE:
0.7049
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M441I
TCGA-55-6987
LUAD
TCGA
LPMTPILE
DEG_SCF_FBW7_2
0.1944
p.M441I
DO25379
LUAD
ICGC
LPMTPILE
DEG_SCF_FBW7_2
0.1944
p.R430Q
TCGA-AX-A05Z
UCEC
TCGA
LPMTPILE
DEG_SCF_FBW7_2
0.7329
p.R430Q
DO40884
UCEC
ICGC
LPMTPILE
DEG_SCF_FBW7_2
0.7329
p.P424S
DO45275
LIRI
ICGC
LPMTPILE
DEG_SCF_FBW7_2
0.1944
p.P443L
DO222710
MELA
ICGC
LPMTPILE
DEG_SCF_FBW7_2
0.5833
p.P440S
SIDM00203
Ewing's Sarcoma
GDSC
LPMTPILE
DEG_SCF_FBW7_2
0.2222
p.P440S
SIDM00256
Neuroblastoma
GDSC
LPMTPILE
DEG_SCF_FBW7_2
0.2222
p.P440S
SIDM00479
Esophageal Carcinoma
GDSC
LPMTPILE
DEG_SCF_FBW7_2
0.2222
p.A434T
SIDM00574
Glioblastoma
GDSC
LPMTPILE
DEG_SCF_FBW7_2
0.7139
p.A434T
no-10
central_nervous_system
COSMIC
LPMTPILE
DEG_SCF_FBW7_2
0.7139
p.T442I
SIDM00982
Glioblastoma
GDSC
LPMTPILE
DEG_SCF_FBW7_2
0.1667
p.T442I
ACH-000323
Brain Cancer
CCLE
LPMTPILE
DEG_SCF_FBW7_2
0.1667
p.T442I
42-MG-BA
central_nervous_system
COSMIC
LPMTPILE
DEG_SCF_FBW7_2
0.1667
p.M441K
ACH-001523
Skin Cancer
CCLE
LPMTPILE
DEG_SCF_FBW7_2
0.1944
p.A424T
ACH-001605
Brain Cancer
CCLE
LPMTPILE
DEG_SCF_FBW7_2
0.1944
p.A424T
no-10
central_nervous_system
COSMIC
LPMTPILE
DEG_SCF_FBW7_2
0.1944
p.T432I
42-MG-BA
central_nervous_system
COSMIC
LPMTPILE
DEG_SCF_FBW7_2
0.8189
Drug responses associated with PHACTR4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPMTPILE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IZ21
Phosphatase and actin regulator 4
DEG_SCF_FBW7_2
429:436
LPMTPILE
FBXW7
0.9924
More...