DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPPFED
Uniprot ID:
P49736
Source protein:
DNA replication licensing factor MCM2
Source gene:
MCM2
Class:
LIG_APCC_ABBA_1
Location:
46:51
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9989
ASA_SCORE:
74.0167
COIL:
0.8177
CONS_SCORE:
0.2271
DSS_SCORE:
0.8142
HELIX:
0.1483
FCONS_SCORE:
1.0716
RIG_SCORE:
0.644
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D51H
TCGA-05-4427
LUAD
TCGA
LPPFED
LIG_APCC_ABBA_1
0.7688
p.D51H
DO23666
LUAD
ICGC
LPPFED
LIG_APCC_ABBA_1
0.7688
p.D51Y
TCGA-18-3416
LUSC
TCGA
LPPFED
LIG_APCC_ABBA_1
0.7325
p.D51Y
DO26423
LUSC
ICGC
LPPFED
LIG_APCC_ABBA_1
0.7325
p.E50D
TCGA-EO-A22R
UCEC
TCGA
LPPFED
LIG_APCC_ABBA_1
0.5647
p.E50D
DO229025
LICA
ICGC
LPPFED
LIG_APCC_ABBA_1
0.5647
p.E50D
DO42713
UCEC
ICGC
LPPFED
LIG_APCC_ABBA_1
0.5647
p.D36N
TCGA-UY-A9PH
BLCA
TCGA
LPPFED
LIG_APCC_ABBA_1
0.0556
p.D36N
DO223594
BLCA
ICGC
LPPFED
LIG_APCC_ABBA_1
0.0556
p.G58V
DO229019
LICA
ICGC
LPPFED
LIG_APCC_ABBA_1
0.1389
p.G58V
DO231026
LUSC
ICGC
LPPFED
LIG_APCC_ABBA_1
0.1389
p.S53F
DO220877
MELA
ICGC
LPPFED
LIG_APCC_ABBA_1
0.7222
p.R44G
SIDM01004
Chronic Myelogenous Leukemia
GDSC
LPPFED
LIG_APCC_ABBA_1
0.2778
p.R44G
ACH-000983
Leukemia
CCLE
LPPFED
LIG_APCC_ABBA_1
0.2778
p.R44G
KCL-22
haematopoietic_and_lymphoid_tissue
COSMIC
LPPFED
LIG_APCC_ABBA_1
0.2778
p.E52Q
SIDM01174
Cervical Carcinoma
GDSC
LPPFED
LIG_APCC_ABBA_1
0.3056
p.E52Q
ACH-001402
Cervical Cancer
CCLE
LPPFED
LIG_APCC_ABBA_1
0.3056
p.E52Q
SW756
cervix
COSMIC
LPPFED
LIG_APCC_ABBA_1
0.3056
p.P42L
SIDM00878
Breast Carcinoma
GDSC
LPPFED
LIG_APCC_ABBA_1
0.2222
p.P42L
ACH-000930
Breast Cancer
CCLE
LPPFED
LIG_APCC_ABBA_1
0.2222
p.P42L
HCC1569
breast
COSMIC
LPPFED
LIG_APCC_ABBA_1
0.2222
p.G61E
SIDM00225
Melanoma
GDSC
LPPFED
LIG_APCC_ABBA_1
0.0556
p.G61E
ACH-002143
Skin Cancer
CCLE
LPPFED
LIG_APCC_ABBA_1
0.0556
p.G61E
IST-MEL1
skin
COSMIC
LPPFED
LIG_APCC_ABBA_1
0.0556
Drug responses associated with MCM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPPFED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49736
DNA replication licensing factor MCM2
LIG_APCC_ABBA_1
46:51
LPPFED
APC,CDC20,FZR1
0.9989
More...