DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPPFQD
Uniprot ID:
Q9P267
Source protein:
Methyl-CpG-binding domain protein 5
Source gene:
MBD5
Class:
LIG_APCC_ABBA_1
Location:
1049:1054
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9949
ASA_SCORE:
93.1167
COIL:
0.9313
CONS_SCORE:
0.3837
DSS_SCORE:
0.6843
HELIX:
0.0343
FCONS_SCORE:
1.2372
RIG_SCORE:
0.7168
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1061L
TCGA-50-6590
LUAD
TCGA
LPPFQD
LIG_APCC_ABBA_1
0.1389
p.L1049P
TCGA-D1-A16X
UCEC
TCGA
LPPFQD
LIG_APCC_ABBA_1
0.7582
p.L1049R
TCGA-D9-A6EC
SKCM
TCGA
LPPFQD
LIG_APCC_ABBA_1
0.8428
p.P1042S
TCGA-DA-A1I7
SKCM
TCGA
LPPFQD
LIG_APCC_ABBA_1
0.1389
p.P1045L
TCGA-EE-A29E
SKCM
TCGA
LPPFQD
LIG_APCC_ABBA_1
0.2222
p.P1045L
DO37831
SKCM
ICGC
LPPFQD
LIG_APCC_ABBA_1
0.2222
p.G1055W
DO8914
COAD
ICGC
LPPFQD
LIG_APCC_ABBA_1
0.3056
p.S1060I
DO229041
LICA
ICGC
LPPFQD
LIG_APCC_ABBA_1
0.1667
p.T1048I
SIDM00222
Mesothelioma
GDSC
LPPFQD
LIG_APCC_ABBA_1
0.3056
p.T1047S
SIDM00789
Colorectal Carcinoma
GDSC
LPPFQD
LIG_APCC_ABBA_1
0.2778
p.T1047S
ACH-000997
Colon/Colorectal Cancer
CCLE
LPPFQD
LIG_APCC_ABBA_1
0.2778
p.T1047S
HCT-15
large_intestine
COSMIC
LPPFQD
LIG_APCC_ABBA_1
0.2778
p.E1047D
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
LPPFQD
LIG_APCC_ABBA_1
0.2778
p.L1049I
KM12
large_intestine
COSMIC
LPPFQD
LIG_APCC_ABBA_1
0.6063
p.L1049I
NCI-H520
lung
COSMIC
LPPFQD
LIG_APCC_ABBA_1
0.6063
p.L1049I
NB12
autonomic_ganglia
COSMIC
LPPFQD
LIG_APCC_ABBA_1
0.6063
p.P1057L
MEL-JUSO
skin
COSMIC
LPPFQD
LIG_APCC_ABBA_1
0.25
Drug responses associated with MBD5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPPFQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P267
Methyl-CpG-binding domain protein 5
LIG_APCC_ABBA_1
1049:1054
LPPFQD
APC,CDC20,FZR1
0.9949
More...