DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPPHAE
Uniprot ID:
Q96F24
Source protein:
Nuclear receptor-binding factor 2
Source gene:
NRBF2
Class:
LIG_APCC_ABBA_1
Location:
230:235
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.997
ASA_SCORE:
75.7
COIL:
0.8135
CONS_SCORE:
0.4465
DSS_SCORE:
0.4776
HELIX:
0.1072
FCONS_SCORE:
1.0895
RIG_SCORE:
0.7296
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P232S
TCGA-17-Z031
LUAD
TCGA
LPPHAE
LIG_APCC_ABBA_1
0.6752
p.T242N
TCGA-29-1691
OV
TCGA
LPPHAE
LIG_APCC_ABBA_1
0.1389
p.S229N
TCGA-AX-A0J1
UCEC
TCGA
LPPHAE
LIG_APCC_ABBA_1
0.3056
p.E235Q
TCGA-K4-AAQO
BLCA
TCGA
LPPHAE
LIG_APCC_ABBA_1
0.6744
p.E225Q
DO219030
BLCA
ICGC
LPPHAE
LIG_APCC_ABBA_1
0.1944
p.A237P
DO229016
COCA
ICGC
LPPHAE
LIG_APCC_ABBA_1
0.2778
p.A237P
FU-OV-1
ovary
COSMIC
LPPHAE
LIG_APCC_ABBA_1
0.2778
p.T232N
DO32133
OV
ICGC
LPPHAE
LIG_APCC_ABBA_1
0.7055
p.G241V
DO37631
SKCM
ICGC
LPPHAE
LIG_APCC_ABBA_1
0.1667
p.A238S
DO41235
UCEC
ICGC
LPPHAE
LIG_APCC_ABBA_1
0.25
p.A238T
OC-314
ovary
COSMIC
LPPHAE
LIG_APCC_ABBA_1
0.25
Drug responses associated with NRBF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPPHAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96F24
Nuclear receptor-binding factor 2
LIG_APCC_ABBA_1
230:235
LPPHAE
APC,CDC20,FZR1
0.997
More...