DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LPPHKE
Uniprot ID:
Q76NI1
Source protein:
Kinase non-catalytic C-lobe domain-containing protein 1
Source gene:
KNDC1
Class:
LIG_APCC_ABBA_1
Location:
1426:1431
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8898
ASA_SCORE:
107.05
COIL:
0.9293
CONS_SCORE:
0.349
DSS_SCORE:
0.3323
HELIX:
0.031
FCONS_SCORE:
0.8639
RIG_SCORE:
0.7308
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1439T
TCGA-B5-A11F
UCEC
TCGA
LPPHKE
LIG_APCC_ABBA_1
0.1111
p.A1439T
DO43618
UCEC
ICGC
LPPHKE
LIG_APCC_ABBA_1
0.1111
p.R1432H
TCGA-B5-A1MV
UCEC
TCGA
LPPHKE
LIG_APCC_ABBA_1
0.3056
p.R1432H
DO43354
UCEC
ICGC
LPPHKE
LIG_APCC_ABBA_1
0.3056
p.G1423E
TCGA-D9-A6EC
SKCM
TCGA
LPPHKE
LIG_APCC_ABBA_1
0.25
p.G1423E
DO50291
SKCM
ICGC
LPPHKE
LIG_APCC_ABBA_1
0.25
p.T1435I
TCGA-EB-A41A
SKCM
TCGA
LPPHKE
LIG_APCC_ABBA_1
0.2222
p.T1435I
DO37429
SKCM
ICGC
LPPHKE
LIG_APCC_ABBA_1
0.2222
p.P1441H
TCGA-ER-A193
SKCM
TCGA
LPPHKE
LIG_APCC_ABBA_1
0.0556
p.P1441H
DO47368
SKCM
ICGC
LPPHKE
LIG_APCC_ABBA_1
0.0556
p.P1441S
TCGA-FI-A2D5
UCEC
TCGA
LPPHKE
LIG_APCC_ABBA_1
0.0556
p.P1441S
DO41331
UCEC
ICGC
LPPHKE
LIG_APCC_ABBA_1
0.0556
p.A1438S
DO229019
LICA
ICGC
LPPHKE
LIG_APCC_ABBA_1
0.1389
p.K1430E
DO229211
THCA
ICGC
LPPHKE
LIG_APCC_ABBA_1
0.591
p.E1431K
SIDM00915
Small Cell Lung Carcinoma
GDSC
LPPHKE
LIG_APCC_ABBA_1
0.7022
p.E1431K
NCI-H378
lung
COSMIC
LPPHKE
LIG_APCC_ABBA_1
0.7022
p.Y1434C
SIDM01259
B-Lymphoblastic Leukemia
GDSC
LPPHKE
LIG_APCC_ABBA_1
0.25
p.Y1434C
ACH-001669
Leukemia
CCLE
LPPHKE
LIG_APCC_ABBA_1
0.25
p.Y1434C
ACH-002238
Leukemia
CCLE
LPPHKE
LIG_APCC_ABBA_1
0.25
p.Y1434C
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
LPPHKE
LIG_APCC_ABBA_1
0.25
p.R1432C
SIDM00668
Non-Cancerous
GDSC
LPPHKE
LIG_APCC_ABBA_1
0.3056
p.R1432C
ACH-002245
Lymphoma
CCLE
LPPHKE
LIG_APCC_ABBA_1
0.3056
p.R1432C
Hs-445
haematopoietic_and_lymphoid_tissue
COSMIC
LPPHKE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with KNDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPPHKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q76NI1
Kinase non-catalytic C-lobe domain-containing protein 1
LIG_APCC_ABBA_1
1426:1431
LPPHKE
APC,CDC20,FZR1
0.8898
More...