DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LPPHSE
Uniprot ID:
Q9UIG8
Source protein:
Solute carrier organic anion transporter family member 3A1
Source gene:
SLCO3A1
Class:
LIG_APCC_ABBA_1
Location:
289:294
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.549
ASA_SCORE:
84.3167
COIL:
0.9123
CONS_SCORE:
0.4412
DSS_SCORE:
0.4291
HELIX:
0.0615
FCONS_SCORE:
0.9405
RIG_SCORE:
0.6387
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M297I
TCGA-04-1652
OV
TCGA
LPPHSE
LIG_APCC_ABBA_1
0.25
p.M297I
DO29248
OV
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.25
p.F283C
TCGA-44-7671
LUAD
TCGA
LPPHSE
LIG_APCC_ABBA_1
0.1667
p.F283C
DO25252
LUAD
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.1667
p.A302P
TCGA-85-7698
LUSC
TCGA
LPPHSE
LIG_APCC_ABBA_1
0.1111
p.A302P
DO27723
LUSC
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.1111
p.P286S
TCGA-DU-6392
LGG
TCGA
LPPHSE
LIG_APCC_ABBA_1
0.25
p.P286S
DO22237
LGG
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.25
p.S279C
TCGA-FW-A3R5
SKCM
TCGA
LPPHSE
LIG_APCC_ABBA_1
0.0556
p.S279C
DO37406
SKCM
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.0556
p.L280F
TCGA-FW-A3R5
SKCM
TCGA
LPPHSE
LIG_APCC_ABBA_1
0.0833
p.L280F
DO37406
SKCM
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.0833
p.A296T
TCGA-G4-6586
COAD
TCGA
LPPHSE
LIG_APCC_ABBA_1
0.2778
p.A296T
DO9698
COAD
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.2778
p.A296T
SIDM00853
Other Sarcomas
GDSC
LPPHSE
LIG_APCC_ABBA_1
0.2778
p.A296T
GCT
soft_tissue
COSMIC
LPPHSE
LIG_APCC_ABBA_1
0.2778
p.E294D
DO229010
COCA
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.5647
p.E294D
DO229013
COCA
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.5647
p.E294D
DO229016
COCA
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.5647
p.E294D
DO229003
COCA
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.5647
p.E294D
DO229005
COCA
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.5647
p.P291T
DO219966
SARC
ICGC
LPPHSE
LIG_APCC_ABBA_1
0.7031
Drug responses associated with SLCO3A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPPHSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UIG8
Solute carrier organic anion transporter family member 3A1
LIG_APCC_ABBA_1
289:294
LPPHSE
APC,CDC20,FZR1
0.549
More...