DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPPYLE
Uniprot ID:
Q8N5D0
Source protein:
WD and tetratricopeptide repeats protein 1
Source gene:
WDTC1
Class:
LIG_APCC_ABBA_1
Location:
358:363
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9551
ASA_SCORE:
55.0333
COIL:
0.3358
CONS_SCORE:
0.5235
DSS_SCORE:
0.4366
HELIX:
0.6452
FCONS_SCORE:
1.1979
RIG_SCORE:
0.7957
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R363H
TCGA-BR-8591
STAD
TCGA
LPPYLE
LIG_APCC_ABBA_1
0.8244
p.R363H
DO47973
STAD
ICGC
LPPYLE
LIG_APCC_ABBA_1
0.8244
p.R363C
TCGA-QG-A5Z2
COAD
TCGA
LPPYLE
LIG_APCC_ABBA_1
0.8301
p.R363C
DO44096
COAD
ICGC
LPPYLE
LIG_APCC_ABBA_1
0.8301
p.A371S
DO228976
LICA
ICGC
LPPYLE
LIG_APCC_ABBA_1
0.1111
p.E357K
SIDM00183
Small Cell Lung Carcinoma
GDSC
LPPYLE
LIG_APCC_ABBA_1
0.3056
p.E357K
LB647-SCLC
lung
COSMIC
LPPYLE
LIG_APCC_ABBA_1
0.3056
p.E356K
ACH-002154
Lung Cancer
CCLE
LPPYLE
LIG_APCC_ABBA_1
0.2778
p.E356K
LB647-SCLC
lung
COSMIC
LPPYLE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with WDTC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPPYLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N5D0
WD and tetratricopeptide repeats protein 1
LIG_APCC_ABBA_1
358:363
LPPYLE
APC,CDC20,FZR1
0.9551
More...