DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LPPYSD
Uniprot ID:
Q8HWS3
Source protein:
DNA-binding protein RFX6
Source gene:
RFX6
Class:
LIG_APCC_ABBA_1
Location:
831:836
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9682
ASA_SCORE:
75.85
COIL:
0.8338
CONS_SCORE:
0.2461
DSS_SCORE:
0.3229
HELIX:
0.0522
FCONS_SCORE:
0.8101
RIG_SCORE:
0.6921
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R829H
TCGA-A5-A0G2
UCEC
TCGA
LPPYSD
LIG_APCC_ABBA_1
0.2778
p.R829H
DO41235
UCEC
ICGC
LPPYSD
LIG_APCC_ABBA_1
0.2778
p.P840L
TCGA-CV-7255
HNSC
TCGA
LPPYSD
LIG_APCC_ABBA_1
0.2222
p.P840L
DO14718
HNSC
ICGC
LPPYSD
LIG_APCC_ABBA_1
0.2222
p.P833L
TCGA-D3-A3ML
SKCM
TCGA
LPPYSD
LIG_APCC_ABBA_1
0.6471
p.P833L
DO47413
SKCM
ICGC
LPPYSD
LIG_APCC_ABBA_1
0.6471
p.D839N
TCGA-D3-A8GI
SKCM
TCGA
LPPYSD
LIG_APCC_ABBA_1
0.25
p.D839N
DO50284
SKCM
ICGC
LPPYSD
LIG_APCC_ABBA_1
0.25
p.D839N
SIDM00080
Melanoma
GDSC
LPPYSD
LIG_APCC_ABBA_1
0.25
p.D839N
ACH-000730
Skin Cancer
CCLE
LPPYSD
LIG_APCC_ABBA_1
0.25
p.D839N
SK-MEL-5
skin
COSMIC
LPPYSD
LIG_APCC_ABBA_1
0.25
p.R829C
TCGA-EE-A2GS
SKCM
TCGA
LPPYSD
LIG_APCC_ABBA_1
0.2778
p.R829C
TCGA-WE-A8ZX
SKCM
TCGA
LPPYSD
LIG_APCC_ABBA_1
0.2778
p.R829C
DO37465
SKCM
ICGC
LPPYSD
LIG_APCC_ABBA_1
0.2778
p.R829C
DO51291
SKCM
ICGC
LPPYSD
LIG_APCC_ABBA_1
0.2778
p.H838Y
TCGA-FS-A1YY
SKCM
TCGA
LPPYSD
LIG_APCC_ABBA_1
0.2778
p.H838Y
DO37415
SKCM
ICGC
LPPYSD
LIG_APCC_ABBA_1
0.2778
p.D846Y
TCGA-L5-A4OE
ESCA
TCGA
LPPYSD
LIG_APCC_ABBA_1
0.0556
p.S823F
TCGA-L5-A8NQ
ESCA
TCGA
LPPYSD
LIG_APCC_ABBA_1
0.1111
p.S823F
DO220885
MELA
ICGC
LPPYSD
LIG_APCC_ABBA_1
0.1111
p.D839V
DO50437
ESAD
ICGC
LPPYSD
LIG_APCC_ABBA_1
0.25
p.L841P
DO218863
SKCA
ICGC
LPPYSD
LIG_APCC_ABBA_1
0.1944
p.S830P
SIDM00789
Colorectal Carcinoma
GDSC
LPPYSD
LIG_APCC_ABBA_1
0.3056
p.S830P
ACH-000997
Colon/Colorectal Cancer
CCLE
LPPYSD
LIG_APCC_ABBA_1
0.3056
p.S830P
ACH-001061
Colon/Colorectal Cancer
CCLE
LPPYSD
LIG_APCC_ABBA_1
0.3056
p.S830P
HCT-15
large_intestine
COSMIC
LPPYSD
LIG_APCC_ABBA_1
0.3056
p.V822I
SIDM00671
T-Cell Non-Hodgkin's Lymphoma
GDSC
LPPYSD
LIG_APCC_ABBA_1
0.0833
p.V822I
ACH-000061
Lymphoma
CCLE
LPPYSD
LIG_APCC_ABBA_1
0.0833
p.V822I
HH
haematopoietic_and_lymphoid_tissue
COSMIC
LPPYSD
LIG_APCC_ABBA_1
0.0833
p.H821Q
SIDM01122
Non-Small Cell Lung Carcinoma
GDSC
LPPYSD
LIG_APCC_ABBA_1
0.0556
p.H821Q
ACH-000853
Lung Cancer
CCLE
LPPYSD
LIG_APCC_ABBA_1
0.0556
p.H821Q
NCI-H661
lung
COSMIC
LPPYSD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with RFX6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPPYSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8HWS3
DNA-binding protein RFX6
LIG_APCC_ABBA_1
831:836
LPPYSD
APC,CDC20,FZR1
0.9682
More...