DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPQTPEQE
Uniprot ID:
O43379
Source protein:
WD repeat-containing protein 62
Source gene:
WDR62
Class:
DEG_SCF_FBW7_2
Location:
1050:1057
E3 ligase:
FBXW7
DEGRON score:
0.9602
ASA_SCORE:
79.85
COIL:
0.5054
CONS_SCORE:
0.3246
DSS_SCORE:
0.6663
HELIX:
0.4823
FCONS_SCORE:
1.0234
RIG_SCORE:
0.6265
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1043S
TCGA-19-5956
GBM
TCGA
LPQTPEQE
DEG_SCF_FBW7_2
0.1389
p.P1043S
DO13863
GBM
ICGC
LPQTPEQE
DEG_SCF_FBW7_2
0.1389
p.R1061H
TCGA-AP-A1DV
UCEC
TCGA
LPQTPEQE
DEG_SCF_FBW7_2
0.2222
p.R1061H
DO43186
UCEC
ICGC
LPQTPEQE
DEG_SCF_FBW7_2
0.2222
p.E1041D
TCGA-BF-A1PU
SKCM
TCGA
LPQTPEQE
DEG_SCF_FBW7_2
0.0833
p.E1041D
DO50278
SKCM
ICGC
LPQTPEQE
DEG_SCF_FBW7_2
0.0833
p.H1062Q
DO225335
BRCA
ICGC
LPQTPEQE
DEG_SCF_FBW7_2
0.1944
p.E1041K
SIDM00525
Osteosarcoma
GDSC
LPQTPEQE
DEG_SCF_FBW7_2
0.0833
p.E1041K
ACH-000359
Bone Cancer
CCLE
LPQTPEQE
DEG_SCF_FBW7_2
0.0833
p.E1041K
MG-63
bone
COSMIC
LPQTPEQE
DEG_SCF_FBW7_2
0.0833
p.E1065D
SIDM00630
Breast Carcinoma
GDSC
LPQTPEQE
DEG_SCF_FBW7_2
0.1111
p.E1065D
ACH-000876
Breast Cancer
CCLE
LPQTPEQE
DEG_SCF_FBW7_2
0.1111
p.E1065D
MDA-MB-415
breast
COSMIC
LPQTPEQE
DEG_SCF_FBW7_2
0.1111
p.E1065A
SIDM00498
Colorectal Carcinoma
GDSC
LPQTPEQE
DEG_SCF_FBW7_2
0.1111
p.E1065A
SNU-C5
large_intestine
COSMIC
LPQTPEQE
DEG_SCF_FBW7_2
0.1111
p.L1060P
ACH-000978
Endometrial/Uterine Cancer
CCLE
LPQTPEQE
DEG_SCF_FBW7_2
0.25
p.L1060P
EN
endometrium
COSMIC
LPQTPEQE
DEG_SCF_FBW7_2
0.25
Drug responses associated with WDR62 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPQTPEQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43379
WD repeat-containing protein 62
DEG_SCF_FBW7_2
1050:1057
LPQTPEQE
FBXW7
0.9602
More...