DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPSTPAHT
Uniprot ID:
Q8TEV9
Source protein:
Guanine nucleotide exchange protein SMCR8
Source gene:
SMCR8
Class:
DEG_SCF_FBW7_1
Location:
597:604
E3 ligase:
FBXW7
DEGRON score:
0.8356
ASA_SCORE:
82.0625
COIL:
0.917
CONS_SCORE:
0.3652
DSS_SCORE:
0.6921
HELIX:
0.0295
FCONS_SCORE:
0.949
RIG_SCORE:
0.6004
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P598L
TCGA-XF-AAN2
BLCA
TCGA
LPSTPAHT
DEG_SCF_FBW7_1
0.6471
p.P598L
DO219052
BLCA
ICGC
LPSTPAHT
DEG_SCF_FBW7_1
0.6471
p.A602T
TCGA-EO-A22T
UCEC
TCGA
LPSTPAHT
DEG_SCF_FBW7_1
0.6028
p.A602T
DO42320
UCEC
ICGC
LPSTPAHT
DEG_SCF_FBW7_1
0.6028
p.S614R
NCI-H1944
lung
COSMIC
LPSTPAHT
DEG_SCF_FBW7_1
0.5
p.E608K
TCGA-A5-A2K5
UCEC
TCGA
LPSTPAHT
DEG_SCF_FBW7_1
0.2222
p.E608K
DO41379
UCEC
ICGC
LPSTPAHT
DEG_SCF_FBW7_1
0.2222
p.E608D
DO229008
LICA
ICGC
LPSTPAHT
DEG_SCF_FBW7_1
0.2222
p.G593C
SIDM00720
Mesothelioma
GDSC
LPSTPAHT
DEG_SCF_FBW7_1
0.2222
p.G593C
SIDM01686
Chronic Myelogenous Leukemia
GDSC
LPSTPAHT
DEG_SCF_FBW7_1
0.2222
p.G593C
SIDM01710
Squamous Cell Lung Carcinoma
GDSC
LPSTPAHT
DEG_SCF_FBW7_1
0.2222
p.D609Y
DO229031
LICA
ICGC
LPSTPAHT
DEG_SCF_FBW7_1
0.1944
p.S591R
TCGA-QK-AA3J
HNSC
TCGA
LPSTPAHT
DEG_SCF_FBW7_1
0.1667
p.S591R
DO52101
HNSC
ICGC
LPSTPAHT
DEG_SCF_FBW7_1
0.1667
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Drug responses associated with SMCR8 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LPSTPAHT
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TEV9
Guanine nucleotide exchange protein SMCR8
DEG_SCF_FBW7_1
597:604
LPSTPAHT
FBXW7
0.8356
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