DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPSTPPPS
Uniprot ID:
Q9BWN1
Source protein:
Proline-rich protein 14
Source gene:
PRR14
Class:
DEG_SCF_FBW7_1
Location:
227:234
E3 ligase:
FBXW7
DEGRON score:
0.9959
ASA_SCORE:
77.2375
COIL:
0.97
CONS_SCORE:
0.721
DSS_SCORE:
0.6189
HELIX:
0.0163
FCONS_SCORE:
0.9035
RIG_SCORE:
0.5887
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R240S
TCGA-ER-A1A1
SKCM
TCGA
LPSTPPPS
DEG_SCF_FBW7_1
0.1667
p.R240S
DO37413
SKCM
ICGC
LPSTPPPS
DEG_SCF_FBW7_1
0.1667
p.R240H
TCGA-FI-A2D0
UCEC
TCGA
LPSTPPPS
DEG_SCF_FBW7_1
0.1667
p.R240H
DO43891
UCEC
ICGC
LPSTPPPS
DEG_SCF_FBW7_1
0.1667
p.R240H
SIDM00469
Pancreatic Carcinoma
GDSC
LPSTPPPS
DEG_SCF_FBW7_1
0.1667
p.R240H
PSN1
pancreas
COSMIC
LPSTPPPS
DEG_SCF_FBW7_1
0.1667
p.R238C
DO227657
COCA
ICGC
LPSTPPPS
DEG_SCF_FBW7_1
0.2222
p.R240C
SIDM00078
Oral Cavity Carcinoma
GDSC
LPSTPPPS
DEG_SCF_FBW7_1
0.1667
p.R240C
ACH-000228
Head and Neck Cancer
CCLE
LPSTPPPS
DEG_SCF_FBW7_1
0.1667
p.R240C
BICR31
upper_aerodigestive_tract
COSMIC
LPSTPPPS
DEG_SCF_FBW7_1
0.1667
p.A224T
SIDM00951
T-Lymphoblastic Leukemia
GDSC
LPSTPPPS
DEG_SCF_FBW7_1
0.25
p.A224T
ACH-002222
Leukemia
CCLE
LPSTPPPS
DEG_SCF_FBW7_1
0.25
p.A224T
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
LPSTPPPS
DEG_SCF_FBW7_1
0.25
Drug responses associated with PRR14 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPSTPPPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BWN1
Proline-rich protein 14
DEG_SCF_FBW7_1
227:234
LPSTPPPS
FBXW7
0.9959
More...