DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPSTPQAS
Uniprot ID:
Q86XK3
Source protein:
Swi5-dependent recombination DNA repair protein 1 homolog
Source gene:
SFR1
Class:
DEG_SCF_FBW7_1
Location:
24:31
E3 ligase:
FBXW7
DEGRON score:
0.9898
ASA_SCORE:
79.225
COIL:
0.9343
CONS_SCORE:
0.2827
DSS_SCORE:
0.6543
HELIX:
0.033
FCONS_SCORE:
0.9399
RIG_SCORE:
0.6119
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S35L
TCGA-CF-A1HR
BLCA
TCGA
LPSTPQAS
DEG_SCF_FBW7_1
0.2222
p.S35L
TCGA-CR-7379
HNSC
TCGA
LPSTPQAS
DEG_SCF_FBW7_1
0.2222
p.P25H
TCGA-D3-A2JC
SKCM
TCGA
LPSTPQAS
DEG_SCF_FBW7_1
0.6583
p.P17L
TCGA-YD-A89C
SKCM
TCGA
LPSTPQAS
DEG_SCF_FBW7_1
0.1389
p.S22L
DO469
BLCA
ICGC
LPSTPQAS
DEG_SCF_FBW7_1
0.2778
p.S22L
DO14174
HNSC
ICGC
LPSTPQAS
DEG_SCF_FBW7_1
0.2778
p.E40K
DO8898
COAD
ICGC
LPSTPQAS
DEG_SCF_FBW7_1
0.0833
p.A16S
DO229026
LICA
ICGC
LPSTPQAS
DEG_SCF_FBW7_1
0.1111
p.E29A
DO50936
LICA
ICGC
LPSTPQAS
DEG_SCF_FBW7_1
0.7701
p.P21S
DO218855
SKCA
ICGC
LPSTPQAS
DEG_SCF_FBW7_1
0.25
p.M34I
DO37941
SKCM
ICGC
LPSTPQAS
DEG_SCF_FBW7_1
0.25
p.R30Q
DO40884
UCEC
ICGC
LPSTPQAS
DEG_SCF_FBW7_1
0.7329
p.A19T
DO42977
UCEC
ICGC
LPSTPQAS
DEG_SCF_FBW7_1
0.1944
p.Q29R
SIDM00948
Burkitt's Lymphoma
GDSC
LPSTPQAS
DEG_SCF_FBW7_1
0.6218
p.Q29R
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
LPSTPQAS
DEG_SCF_FBW7_1
0.6218
p.Q16R
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
LPSTPQAS
DEG_SCF_FBW7_1
0.1111
p.R41I
HCC2998
large_intestine
COSMIC
LPSTPQAS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with SFR1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPSTPQAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86XK3
Swi5-dependent recombination DNA repair protein 1 homolog
DEG_SCF_FBW7_1
24:31
LPSTPQAS
FBXW7
0.9898
More...