DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPSTPTAS
Uniprot ID:
Q8NEY1
Source protein:
Neuron navigator 1
Source gene:
NAV1
Class:
DEG_SCF_FBW7_1
Location:
441:448
E3 ligase:
FBXW7
DEGRON score:
0.9982
ASA_SCORE:
71.9375
COIL:
0.9055
CONS_SCORE:
0.5187
DSS_SCORE:
0.5214
HELIX:
0.0543
FCONS_SCORE:
1.0945
RIG_SCORE:
0.6192
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V455M
TCGA-78-7159
LUAD
TCGA
LPSTPTAS
DEG_SCF_FBW7_1
0.1389
p.R457C
TCGA-AZ-4315
COAD
TCGA
LPSTPTAS
DEG_SCF_FBW7_1
0.0833
p.S452L
TCGA-CU-A3KJ
BLCA
TCGA
LPSTPTAS
DEG_SCF_FBW7_1
0.6667
p.P445S
TCGA-YC-A89H
BLCA
TCGA
LPSTPTAS
DEG_SCF_FBW7_1
0.6752
p.S440C
SIDM00854
Burkitt's Lymphoma
GDSC
LPSTPTAS
DEG_SCF_FBW7_1
0.75
p.S440C
GA-10
haematopoietic_and_lymphoid_tissue
COSMIC
LPSTPTAS
DEG_SCF_FBW7_1
0.75
p.S453C
GA-10
haematopoietic_and_lymphoid_tissue
COSMIC
LPSTPTAS
DEG_SCF_FBW7_1
0.6389
p.L446I
SW900
lung
COSMIC
LPSTPTAS
DEG_SCF_FBW7_1
0.7174
Drug responses associated with NAV1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPSTPTAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NEY1
Neuron navigator 1
DEG_SCF_FBW7_1
441:448
LPSTPTAS
FBXW7
0.9982
More...