DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTAHVMPS
Uniprot ID:
Q5SZL2
Source protein:
Centrosomal protein of 85 kDa-like
Source gene:
CEP85L
Class:
DEG_SIAH_1
Location:
97:105
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.97
ASA_SCORE:
58.1556
COIL:
0.772
CONS_SCORE:
0.3122
DSS_SCORE:
0.4664
HELIX:
0.0433
FCONS_SCORE:
1.0929
RIG_SCORE:
0.716
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T99A
TCGA-55-7995
LUAD
TCGA
LPTAHVMPS
DEG_SIAH_1
0.6028
p.T99A
DO45323
LUAD
ICGC
LPTAHVMPS
DEG_SIAH_1
0.6028
p.T102A
TCGA-CV-7101
HNSC
TCGA
LPTAHVMPS
DEG_SIAH_1
0.7139
p.T102A
DO15310
HNSC
ICGC
LPTAHVMPS
DEG_SIAH_1
0.7139
p.P101S
TCGA-CX-7086
HNSC
TCGA
LPTAHVMPS
DEG_SIAH_1
0.6752
p.P101S
DO15046
HNSC
ICGC
LPTAHVMPS
DEG_SIAH_1
0.6752
p.V105L
TCGA-K7-A6G5
LIHC
TCGA
LPTAHVMPS
DEG_SIAH_1
0.6765
p.V105L
DO48602
LIHC
ICGC
LPTAHVMPS
DEG_SIAH_1
0.6765
p.A112T
DO225213
BRCA
ICGC
LPTAHVMPS
DEG_SIAH_1
0.1389
p.A112T
DO227529
BRCA
ICGC
LPTAHVMPS
DEG_SIAH_1
0.1389
p.S111R
DO229009
LICA
ICGC
LPTAHVMPS
DEG_SIAH_1
0.1667
p.S115F
DO222644
MELA
ICGC
LPTAHVMPS
DEG_SIAH_1
0.0556
p.P107L
SIDM01126
Small Cell Lung Carcinoma
GDSC
LPTAHVMPS
DEG_SIAH_1
0.2778
p.P107L
SIDM01112
Osteosarcoma
GDSC
LPTAHVMPS
DEG_SIAH_1
0.2778
p.P107L
SIDM00257
Neuroblastoma
GDSC
LPTAHVMPS
DEG_SIAH_1
0.2778
p.P93A
SIDM00383
Gastric Carcinoma
GDSC
LPTAHVMPS
DEG_SIAH_1
0.2222
p.P93A
ACH-002198
Gastric Cancer
CCLE
LPTAHVMPS
DEG_SIAH_1
0.2222
p.P93A
SCH
stomach
COSMIC
LPTAHVMPS
DEG_SIAH_1
0.2222
p.L100V
SIDM00006
Other Solid Cancers
GDSC
LPTAHVMPS
DEG_SIAH_1
0.6765
p.L100V
ACH-001552
Skin Cancer
CCLE
LPTAHVMPS
DEG_SIAH_1
0.6765
p.L100V
MCC26
skin
COSMIC
LPTAHVMPS
DEG_SIAH_1
0.6765
p.S108P
SIDM01618
B-Lymphoblastic Leukemia
GDSC
LPTAHVMPS
DEG_SIAH_1
0.25
p.S108P
ACH-000942
Leukemia
CCLE
LPTAHVMPS
DEG_SIAH_1
0.25
p.P90A
SCH
stomach
COSMIC
LPTAHVMPS
DEG_SIAH_1
0.1389
p.E115G
SNU-175
large_intestine
COSMIC
LPTAHVMPS
DEG_SIAH_1
0.0556
p.L97V
MCC26
skin
COSMIC
LPTAHVMPS
DEG_SIAH_1
0.5654
p.L114R
HCC2998
large_intestine
COSMIC
LPTAHVMPS
DEG_SIAH_1
0.0833
p.D113E
SBC-5
lung
COSMIC
LPTAHVMPS
DEG_SIAH_1
0.5556
Drug responses associated with CEP85L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTAHVMPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5SZL2
Centrosomal protein of 85 kDa-like
DEG_SIAH_1
97:105
LPTAHVMPS
SIAH1,SIAH2,SIAH3
0.97
More...