DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTAHVRPS
Uniprot ID:
Q92859
Source protein:
Neogenin
Source gene:
NEO1
Class:
DEG_SIAH_1
Location:
1348:1356
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.7472
ASA_SCORE:
95
COIL:
0.9169
CONS_SCORE:
0.3037
DSS_SCORE:
0.6639
HELIX:
0.0328
FCONS_SCORE:
0.7486
RIG_SCORE:
0.605
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1345D
TCGA-19-1387
GBM
TCGA
LPTAHVRPS
DEG_SIAH_1
0.25
p.A1363V
TCGA-VQ-A8PT
STAD
TCGA
LPTAHVRPS
DEG_SIAH_1
0.1389
p.T1363S
DO233229
GACA
ICGC
LPTAHVRPS
DEG_SIAH_1
0.1389
p.V1353L
DO229025
LICA
ICGC
LPTAHVRPS
DEG_SIAH_1
0.6765
p.P1357S
DO220899
MELA
ICGC
LPTAHVRPS
DEG_SIAH_1
0.3056
p.P1357S
DO51256
SKCM
ICGC
LPTAHVRPS
DEG_SIAH_1
0.3056
p.P1357L
DO38123
SKCM
ICGC
LPTAHVRPS
DEG_SIAH_1
0.3056
p.P1357L
KYM-1
soft_tissue
COSMIC
LPTAHVRPS
DEG_SIAH_1
0.3056
p.P1357L
CL-34
large_intestine
COSMIC
LPTAHVRPS
DEG_SIAH_1
0.3056
p.A1352V
DO51776
STAD
ICGC
LPTAHVRPS
DEG_SIAH_1
0.6936
p.I1356T
DO51761
STAD
ICGC
LPTAHVRPS
DEG_SIAH_1
0.7078
p.V1364M
SIDM00367
Small Cell Lung Carcinoma
GDSC
LPTAHVRPS
DEG_SIAH_1
0.1111
p.V1364M
SBC-3
lung
COSMIC
LPTAHVRPS
DEG_SIAH_1
0.1111
p.A1363T
SIDM01154
T-Lymphoblastic Leukemia
GDSC
LPTAHVRPS
DEG_SIAH_1
0.1389
p.A1363T
ACH-000953
Leukemia
CCLE
LPTAHVRPS
DEG_SIAH_1
0.1389
p.A1363T
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
LPTAHVRPS
DEG_SIAH_1
0.1389
p.T1350I
SIDM00783
Colorectal Carcinoma
GDSC
LPTAHVRPS
DEG_SIAH_1
0.5966
p.T1350I
ACH-000971
Colon/Colorectal Cancer
CCLE
LPTAHVRPS
DEG_SIAH_1
0.5966
p.T1350I
HCT-116
large_intestine
COSMIC
LPTAHVRPS
DEG_SIAH_1
0.5966
p.A1352T
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
LPTAHVRPS
DEG_SIAH_1
0.7139
p.T1339I
HCT-116
large_intestine
COSMIC
LPTAHVRPS
DEG_SIAH_1
0.0833
p.V1353M
SBC-3
lung
COSMIC
LPTAHVRPS
DEG_SIAH_1
0.7208
p.G1353E
COLO-679
skin
COSMIC
LPTAHVRPS
DEG_SIAH_1
0.7199
Drug responses associated with NEO1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTAHVRPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92859
Neogenin
DEG_SIAH_1
1348:1356
LPTAHVRPS
SIAH1,SIAH2,SIAH3
0.7472
More...