DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPDMS
Uniprot ID:
Q9H0D2
Source protein:
Zinc finger protein 541
Source gene:
ZNF541
Class:
DEG_SCF_FBW7_1
Location:
58:64
E3 ligase:
FBXW7
DEGRON score:
0.9625
ASA_SCORE:
67.8286
COIL:
0.804
CONS_SCORE:
0.4301
DSS_SCORE:
0.6312
HELIX:
0.0974
FCONS_SCORE:
1.0027
RIG_SCORE:
0.6695
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S50T
TCGA-AR-A24Q
BRCA
TCGA
LPTPDMS
DEG_SCF_FBW7_1
0.1111
p.S50T
DO3524
BRCA
ICGC
LPTPDMS
DEG_SCF_FBW7_1
0.1111
p.T60M
TCGA-DM-A28A
COAD
TCGA
LPTPDMS
DEG_SCF_FBW7_1
0.7423
p.T60M
DO7878
COAD
ICGC
LPTPDMS
DEG_SCF_FBW7_1
0.7423
p.P54L
TCGA-L5-A8NV
ESCA
TCGA
LPTPDMS
DEG_SCF_FBW7_1
0.2222
p.P54L
SIDM00856
Other Solid Cancers
GDSC
LPTPDMS
DEG_SCF_FBW7_1
0.2222
p.S64F
DO233938
GACA
ICGC
LPTPDMS
DEG_SCF_FBW7_1
0.7982
p.P61T
DO229032
LICA
ICGC
LPTPDMS
DEG_SCF_FBW7_1
0.7031
p.P59S
DO222731
MELA
ICGC
LPTPDMS
DEG_SCF_FBW7_1
0.5641
p.T74S
DO36822
READ
ICGC
LPTPDMS
DEG_SCF_FBW7_1
0.0556
p.L58F
SIDM00623
Other Blood Cancers
GDSC
LPTPDMS
DEG_SCF_FBW7_1
0.6981
p.L58F
Mo-T
haematopoietic_and_lymphoid_tissue
COSMIC
LPTPDMS
DEG_SCF_FBW7_1
0.6981
p.D73Y
SIDM00018
Acute Myeloid Leukemia
GDSC
LPTPDMS
DEG_SCF_FBW7_1
0.0833
p.D73Y
ACH-000498
Leukemia
CCLE
LPTPDMS
DEG_SCF_FBW7_1
0.0833
p.D73Y
KO52
haematopoietic_and_lymphoid_tissue
COSMIC
LPTPDMS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with ZNF541 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPDMS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H0D2
Zinc finger protein 541
DEG_SCF_FBW7_1
58:64
LPTPDMS
FBXW7
0.9625
More...