DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPERS
Uniprot ID:
P35713
Source protein:
Transcription factor SOX-18
Source gene:
SOX18
Class:
DEG_SCF_FBW7_1
Location:
212:218
E3 ligase:
FBXW7
DEGRON score:
0.998
ASA_SCORE:
50.4857
COIL:
0.9367
CONS_SCORE:
0.6202
DSS_SCORE:
0.6645
HELIX:
0.0184
FCONS_SCORE:
1.4079
RIG_SCORE:
0.6488
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D208N
SIDM01943
Colorectal Carcinoma
GDSC
LPTPERS
DEG_SCF_FBW7_1
0.2222
p.E206K
ACH-000940
Endometrial/Uterine Cancer
CCLE
LPTPERS
DEG_SCF_FBW7_1
0.1667
p.E227K
DO15791
HNSC
ICGC
LPTPERS
DEG_SCF_FBW7_1
0.0833
p.A228T
DO229005
COCA
ICGC
LPTPERS
DEG_SCF_FBW7_1
0.0556
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Drug responses associated with SOX18 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LPTPERS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35713
Transcription factor SOX-18
DEG_SCF_FBW7_1
212:218
LPTPERS
FBXW7
0.998
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