DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPGSS
Uniprot ID:
Q702N8
Source protein:
Xin actin-binding repeat-containing protein 1
Source gene:
XIRP1
Class:
DEG_SCF_FBW7_1
Location:
862:868
E3 ligase:
FBXW7
DEGRON score:
0.9613
ASA_SCORE:
65.6857
COIL:
0.883
CONS_SCORE:
0.6323
DSS_SCORE:
0.6077
HELIX:
0.0207
FCONS_SCORE:
0.9348
RIG_SCORE:
0.6073
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D875N
TCGA-17-Z022
LUAD
TCGA
LPTPGSS
DEG_SCF_FBW7_1
0.1389
p.P876H
TCGA-D3-A1Q1
SKCM
TCGA
LPTPGSS
DEG_SCF_FBW7_1
0.1111
p.P876H
DO37445
SKCM
ICGC
LPTPGSS
DEG_SCF_FBW7_1
0.1111
p.P876L
TCGA-G4-6586
COAD
TCGA
LPTPGSS
DEG_SCF_FBW7_1
0.1111
p.P876L
DO9698
COAD
ICGC
LPTPGSS
DEG_SCF_FBW7_1
0.1111
p.S867R
TCGA-X6-A7WB
SARC
TCGA
LPTPGSS
DEG_SCF_FBW7_1
0.6316
p.S867R
DO220314
SARC
ICGC
LPTPGSS
DEG_SCF_FBW7_1
0.6316
p.P859L
TCGA-XK-AAIW
PRAD
TCGA
LPTPGSS
DEG_SCF_FBW7_1
0.25
p.P859L
DO51407
PRAD
ICGC
LPTPGSS
DEG_SCF_FBW7_1
0.25
p.P859L
SIDM01664
Prostate Carcinoma
GDSC
LPTPGSS
DEG_SCF_FBW7_1
0.25
p.P865T
DO233804
GACA
ICGC
LPTPGSS
DEG_SCF_FBW7_1
0.7031
p.P863S
DO229055
LICA
ICGC
LPTPGSS
DEG_SCF_FBW7_1
0.5641
p.E872K
DO49113
PACA
ICGC
LPTPGSS
DEG_SCF_FBW7_1
0.2222
p.R861K
SIDM00683
Prostate Carcinoma
GDSC
LPTPGSS
DEG_SCF_FBW7_1
0.3056
p.R861K
ACH-000977
lymph_node
CCLE
LPTPGSS
DEG_SCF_FBW7_1
0.3056
p.R861K
LNCaP-Clone-FGC
prostate
COSMIC
LPTPGSS
DEG_SCF_FBW7_1
0.3056
p.D875V
SIDM00564
Ovarian Carcinoma
GDSC
LPTPGSS
DEG_SCF_FBW7_1
0.1389
p.D875V
ACH-000527
Ovarian Cancer
CCLE
LPTPGSS
DEG_SCF_FBW7_1
0.1389
p.D875V
ACH-001611
Brain Cancer
CCLE
LPTPGSS
DEG_SCF_FBW7_1
0.1389
p.D875V
OVISE
ovary
COSMIC
LPTPGSS
DEG_SCF_FBW7_1
0.1389
p.P876A
SIDM01318
Hepatocellular Carcinoma
GDSC
LPTPGSS
DEG_SCF_FBW7_1
0.1111
p.Q856R
ACH-001033
Unknown
CCLE
LPTPGSS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with XIRP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPGSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q702N8
Xin actin-binding repeat-containing protein 1
DEG_SCF_FBW7_1
862:868
LPTPGSS
FBXW7
0.9613
More...