DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPLTE
Uniprot ID:
Q53EV4
Source protein:
Leucine-rich repeat-containing protein 23
Source gene:
LRRC23
Class:
DEG_SCF_FBW7_2
Location:
44:50
E3 ligase:
FBXW7
DEGRON score:
0.9981
ASA_SCORE:
61.7571
COIL:
0.7611
CONS_SCORE:
0.714
DSS_SCORE:
0.6047
HELIX:
0.1536
FCONS_SCORE:
1.0445
RIG_SCORE:
0.7959
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E38Q
TCGA-78-7149
LUAD
TCGA
LPTPLTE
DEG_SCF_FBW7_2
0.1667
p.E38Q
TCGA-DK-AA6L
BLCA
TCGA
LPTPLTE
DEG_SCF_FBW7_2
0.1667
p.E38Q
DO219002
BLCA
ICGC
LPTPLTE
DEG_SCF_FBW7_2
0.1667
p.E38Q
DO23790
LUAD
ICGC
LPTPLTE
DEG_SCF_FBW7_2
0.1667
p.G36R
TCGA-85-8584
LUSC
TCGA
LPTPLTE
DEG_SCF_FBW7_2
0.1111
p.G36R
DO45438
LUSC
ICGC
LPTPLTE
DEG_SCF_FBW7_2
0.1111
p.E41K
TCGA-93-8067
LUAD
TCGA
LPTPLTE
DEG_SCF_FBW7_2
0.25
p.E41K
DO25113
LUAD
ICGC
LPTPLTE
DEG_SCF_FBW7_2
0.25
p.F39L
TCGA-A5-A0G2
UCEC
TCGA
LPTPLTE
DEG_SCF_FBW7_2
0.1944
p.F39L
TCGA-D8-A1Y0
BRCA
TCGA
LPTPLTE
DEG_SCF_FBW7_2
0.1944
p.F39L
DO3376
BRCA
ICGC
LPTPLTE
DEG_SCF_FBW7_2
0.1944
p.F39L
DO41235
UCEC
ICGC
LPTPLTE
DEG_SCF_FBW7_2
0.1944
p.P45S
DO50884
LICA
ICGC
LPTPLTE
DEG_SCF_FBW7_2
0.5641
p.P47L
DO38404
STAD
ICGC
LPTPLTE
DEG_SCF_FBW7_2
0.7582
p.G56W
SIDM01016
T-Lymphoblastic Leukemia
GDSC
LPTPLTE
DEG_SCF_FBW7_2
0.1667
p.G56W
ACH-000995
Leukemia
CCLE
LPTPLTE
DEG_SCF_FBW7_2
0.1667
Drug responses associated with LRRC23 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPLTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53EV4
Leucine-rich repeat-containing protein 23
DEG_SCF_FBW7_2
44:50
LPTPLTE
FBXW7
0.9981
More...