DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPMTS
Uniprot ID:
Q9UPQ9
Source protein:
Trinucleotide repeat-containing gene 6B protein
Source gene:
TNRC6B
Class:
DEG_SCF_FBW7_1
Location:
925:931
E3 ligase:
FBXW7
DEGRON score:
0.9974
ASA_SCORE:
87.6857
COIL:
0.9364
CONS_SCORE:
0.3316
DSS_SCORE:
0.6626
HELIX:
0.0494
FCONS_SCORE:
1.0798
RIG_SCORE:
0.6281
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A940V
DO222842
COCA
ICGC
LPTPMTS
DEG_SCF_FBW7_1
0.0833
p.M940L
DO229016
COCA
ICGC
LPTPMTS
DEG_SCF_FBW7_1
0.0833
p.T927I
DO50364
ESAD
ICGC
LPTPMTS
DEG_SCF_FBW7_1
0.7078
p.Q915P
DO49663
LIAD
ICGC
LPTPMTS
DEG_SCF_FBW7_1
0.0556
p.M940K
DO46376
OV
ICGC
LPTPMTS
DEG_SCF_FBW7_1
0.0833
p.P929S
DO229462
SKCA
ICGC
LPTPMTS
DEG_SCF_FBW7_1
0.6752
p.P931H
DO37440
SKCM
ICGC
LPTPMTS
DEG_SCF_FBW7_1
0.7694
p.N924K
DO229221
THCA
ICGC
LPTPMTS
DEG_SCF_FBW7_1
0.3056
p.Q925H
DO219773
UCEC
ICGC
LPTPMTS
DEG_SCF_FBW7_1
0.7582
p.A939V
DO43290
UCEC
ICGC
LPTPMTS
DEG_SCF_FBW7_1
0.2222
p.S933L
SIDM01175
Other Sarcomas
GDSC
LPTPMTS
DEG_SCF_FBW7_1
0.2778
p.S933L
SIDM01007
T-Lymphoblastic Leukemia
GDSC
LPTPMTS
DEG_SCF_FBW7_1
0.2778
p.S933L
ACH-002309
Sarcoma
CCLE
LPTPMTS
DEG_SCF_FBW7_1
0.2778
p.S933L
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
LPTPMTS
DEG_SCF_FBW7_1
0.2778
p.S933L
SW684
soft_tissue
COSMIC
LPTPMTS
DEG_SCF_FBW7_1
0.2778
p.E922K
SIDM01619
Endometrial Carcinoma
GDSC
LPTPMTS
DEG_SCF_FBW7_1
0.25
p.E922K
ACH-000984
Endometrial/Uterine Cancer
CCLE
LPTPMTS
DEG_SCF_FBW7_1
0.25
p.R921H
ACH-000989
Colon/Colorectal Cancer
CCLE
LPTPMTS
DEG_SCF_FBW7_1
0.2222
p.R921H
SNU-175
large_intestine
COSMIC
LPTPMTS
DEG_SCF_FBW7_1
0.2222
p.A926P
ACH-001270
Sarcoma
CCLE
LPTPMTS
DEG_SCF_FBW7_1
0.7503
p.A933V
ACH-001703
Lymphoma
CCLE
LPTPMTS
DEG_SCF_FBW7_1
0.2778
p.A933V
VAL
haematopoietic_and_lymphoid_tissue
COSMIC
LPTPMTS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with TNRC6B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPMTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPQ9
Trinucleotide repeat-containing gene 6B protein
DEG_SCF_FBW7_1
925:931
LPTPMTS
FBXW7
0.9974
More...