DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPPVT
Uniprot ID:
O95104
Source protein:
SR-related and CTD-associated factor 4
Source gene:
SCAF4
Class:
DEG_SCF_FBW7_1
Location:
817:823
E3 ligase:
FBXW7
DEGRON score:
0.9835
ASA_SCORE:
85.9286
COIL:
0.9684
CONS_SCORE:
0.3217
DSS_SCORE:
0.5376
HELIX:
0.0147
FCONS_SCORE:
1.0169
RIG_SCORE:
0.6818
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T831S
TCGA-37-4133
LUSC
TCGA
LPTPPVT
DEG_SCF_FBW7_1
0.1111
p.T831S
DO26465
LUSC
ICGC
LPTPPVT
DEG_SCF_FBW7_1
0.1111
p.P811A
TCGA-A6-A56B
COAD
TCGA
LPTPPVT
DEG_SCF_FBW7_1
0.1667
p.G830C
TCGA-D3-A2JC
SKCM
TCGA
LPTPPVT
DEG_SCF_FBW7_1
0.1389
p.G830C
DO47578
SKCM
ICGC
LPTPPVT
DEG_SCF_FBW7_1
0.1389
p.A808V
DO229218
THCA
ICGC
LPTPPVT
DEG_SCF_FBW7_1
0.0833
p.Q832K
SIDM00151
Ovarian Carcinoma
GDSC
LPTPPVT
DEG_SCF_FBW7_1
0.0833
p.Q832K
ACH-000966
Ovarian Cancer
CCLE
LPTPPVT
DEG_SCF_FBW7_1
0.0833
p.Q832K
IGROV-1
ovary
COSMIC
LPTPPVT
DEG_SCF_FBW7_1
0.0833
p.N816S
SIDM00035
Thyroid Gland Carcinoma
GDSC
LPTPPVT
DEG_SCF_FBW7_1
0.3056
p.Q810K
IGROV-1
ovary
COSMIC
LPTPPVT
DEG_SCF_FBW7_1
0.1389
p.Q817K
IGROV-1
ovary
COSMIC
LPTPPVT
DEG_SCF_FBW7_1
0.6944
Drug responses associated with SCAF4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPPVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95104
SR-related and CTD-associated factor 4
DEG_SCF_FBW7_1
817:823
LPTPPVT
FBXW7
0.9835
More...