DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPQEE
Uniprot ID:
O15069
Source protein:
NAC-alpha domain-containing protein 1
Source gene:
NACAD
Class:
DEG_SCF_FBW7_2
Location:
546:552
E3 ligase:
FBXW7
DEGRON score:
0.959
ASA_SCORE:
105.0143
COIL:
0.9143
CONS_SCORE:
0.3287
DSS_SCORE:
0.6635
HELIX:
0.0626
FCONS_SCORE:
0.92
RIG_SCORE:
0.6684
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S554R
TCGA-AJ-A3TW
UCEC
TCGA
LPTPQEE
DEG_SCF_FBW7_2
0.2778
p.S554R
DO43723
UCEC
ICGC
LPTPQEE
DEG_SCF_FBW7_2
0.2778
p.A543V
DO233652
GACA
ICGC
LPTPQEE
DEG_SCF_FBW7_2
0.25
p.T548P
DO230659
LAML
ICGC
LPTPQEE
DEG_SCF_FBW7_2
0.7031
p.T548P
DO231140
LAML
ICGC
LPTPQEE
DEG_SCF_FBW7_2
0.7031
p.T548P
ACH-001100
CCLE
LPTPQEE
DEG_SCF_FBW7_2
0.7031
p.T548P
ACH-002313
Lymphoma
CCLE
LPTPQEE
DEG_SCF_FBW7_2
0.7031
p.T548P
TK
haematopoietic_and_lymphoid_tissue
COSMIC
LPTPQEE
DEG_SCF_FBW7_2
0.7031
p.A543E
DO229018
LICA
ICGC
LPTPQEE
DEG_SCF_FBW7_2
0.25
p.P562S
SIDM00007
Other Solid Cancers
GDSC
LPTPQEE
DEG_SCF_FBW7_2
0.0556
p.P562S
ACH-001550
Skin Cancer
CCLE
LPTPQEE
DEG_SCF_FBW7_2
0.0556
p.P562S
MCC13
skin
COSMIC
LPTPQEE
DEG_SCF_FBW7_2
0.0556
p.S540F
SIDM00937
Oral Cavity Carcinoma
GDSC
LPTPQEE
DEG_SCF_FBW7_2
0.1667
p.S540F
CAL-27
upper_aerodigestive_tract
COSMIC
LPTPQEE
DEG_SCF_FBW7_2
0.1667
Drug responses associated with NACAD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPQEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15069
NAC-alpha domain-containing protein 1
DEG_SCF_FBW7_2
546:552
LPTPQEE
FBXW7
0.959
More...