DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPQNT
Uniprot ID:
Q5VU43
Source protein:
Myomegalin
Source gene:
PDE4DIP
Class:
DEG_SCF_FBW7_1
Location:
1678:1684
E3 ligase:
FBXW7
DEGRON score:
0.9933
ASA_SCORE:
102.5
COIL:
0.956
CONS_SCORE:
0.5642
DSS_SCORE:
0.7601
HELIX:
0.023
FCONS_SCORE:
1.0003
RIG_SCORE:
0.6029
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1669D
TCGA-22-4593
LUSC
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.0833
p.I1676V
TCGA-2W-A8YY
CESC
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.2778
p.I1676V
TCGA-37-3789
LUSC
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.2778
p.S1673N
TCGA-2W-A8YY
CESC
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.6389
p.S1673T
TCGA-44-8119
LUAD
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.6389
p.A1688T
TCGA-AP-A1DK
UCEC
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.2222
p.L1678F
TCGA-BR-8591
STAD
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.6981
p.L1678F
TCGA-EO-A3AU
UCEC
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.6981
p.S1693L
TCGA-EB-A97M
SKCM
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.0833
p.E1670K
TCGA-EE-A2GO
SKCM
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.1111
p.E1670K
TCGA-Z2-AA3V
SKCM
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.1111
p.E1670K
TCGA-ZH-A8Y5
CHOL
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.1111
p.E1670K
SIDM00990
Non-Small Cell Lung Carcinoma
GDSC
LPTPQNT
DEG_SCF_FBW7_1
0.1111
p.E1670K
SIDM01525
Acute Myeloid Leukemia
GDSC
LPTPQNT
DEG_SCF_FBW7_1
0.1111
p.E1687K
TCGA-EO-A22U
UCEC
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.25
p.A1669V
TCGA-FS-A4F0
SKCM
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.0833
p.P1681L
TCGA-RP-A694
SKCM
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.7582
p.P1681T
TCGA-VD-A8KL
UVM
TCGA
LPTPQNT
DEG_SCF_FBW7_1
0.7031
p.P1684L
DO51948
BLCA
ICGC
LPTPQNT
DEG_SCF_FBW7_1
0.7582
p.D1688N
DO222527
MELA
ICGC
LPTPQNT
DEG_SCF_FBW7_1
0.2222
p.P1675S
SIDM00084
Glioblastoma
GDSC
LPTPQNT
DEG_SCF_FBW7_1
0.25
p.P1675S
SF295
central_nervous_system
COSMIC
LPTPQNT
DEG_SCF_FBW7_1
0.25
p.E1670Q
SIDM00183
Small Cell Lung Carcinoma
GDSC
LPTPQNT
DEG_SCF_FBW7_1
0.1111
p.Q1682H
SIDM00488
Colorectal Carcinoma
GDSC
LPTPQNT
DEG_SCF_FBW7_1
0.647
p.Q1682H
ACH-002345
Colon/Colorectal Cancer
CCLE
LPTPQNT
DEG_SCF_FBW7_1
0.647
p.Q1682H
CaR-1
large_intestine
COSMIC
LPTPQNT
DEG_SCF_FBW7_1
0.647
p.S1691G
ACH-000130
Leukemia
CCLE
LPTPQNT
DEG_SCF_FBW7_1
0.1389
p.P1675T
ACH-000566
Bladder Cancer
CCLE
LPTPQNT
DEG_SCF_FBW7_1
0.25
p.K1693R
ACH-000987
Skin Cancer
CCLE
LPTPQNT
DEG_SCF_FBW7_1
0.0833
p.K1693R
Mewo
skin
COSMIC
LPTPQNT
DEG_SCF_FBW7_1
0.0833
p.P1685R
NCI-H661
lung
COSMIC
LPTPQNT
DEG_SCF_FBW7_1
0.3056
p.A1688V
SNU-C2B
large_intestine
COSMIC
LPTPQNT
DEG_SCF_FBW7_1
0.2222
p.S1671C
NCI-H2135
lung
COSMIC
LPTPQNT
DEG_SCF_FBW7_1
0.5833
p.G1691V
SNU-81
large_intestine
COSMIC
LPTPQNT
DEG_SCF_FBW7_1
0.1389
p.L1675F
LNCaP-Clone-FGC
prostate
COSMIC
LPTPQNT
DEG_SCF_FBW7_1
0.25
Drug responses associated with PDE4DIP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPQNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VU43
Myomegalin
DEG_SCF_FBW7_1
1678:1684
LPTPQNT
FBXW7
0.9933
More...