DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPSST
Uniprot ID:
Q8IUM7
Source protein:
Neuronal PAS domain-containing protein 4
Source gene:
NPAS4
Class:
DEG_SCF_FBW7_1
Location:
448:454
E3 ligase:
FBXW7
DEGRON score:
0.9774
ASA_SCORE:
76.4429
COIL:
0.8839
CONS_SCORE:
0.2819
DSS_SCORE:
0.6138
HELIX:
0.0957
FCONS_SCORE:
0.8919
RIG_SCORE:
0.6764
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S452F
TCGA-D3-A8GM
SKCM
TCGA
LPTPSST
DEG_SCF_FBW7_1
0.6871
p.S452F
DO50288
SKCM
ICGC
LPTPSST
DEG_SCF_FBW7_1
0.6871
p.S452F
SIDM00140
Melanoma
GDSC
LPTPSST
DEG_SCF_FBW7_1
0.6871
p.S452F
ACH-000968
Skin Cancer
CCLE
LPTPSST
DEG_SCF_FBW7_1
0.6871
p.S452F
COLO-792
skin
COSMIC
LPTPSST
DEG_SCF_FBW7_1
0.6871
p.L455F
TCGA-DA-A3F5
SKCM
TCGA
LPTPSST
DEG_SCF_FBW7_1
0.3056
p.L455F
DO37435
SKCM
ICGC
LPTPSST
DEG_SCF_FBW7_1
0.3056
p.T450I
TCGA-E6-A1LX
UCEC
TCGA
LPTPSST
DEG_SCF_FBW7_1
0.7078
p.T450I
TCGA-FW-A3R5
SKCM
TCGA
LPTPSST
DEG_SCF_FBW7_1
0.7078
p.T450I
DO37406
SKCM
ICGC
LPTPSST
DEG_SCF_FBW7_1
0.7078
p.T450I
DO41020
UCEC
ICGC
LPTPSST
DEG_SCF_FBW7_1
0.7078
p.T450I
SIDM00447
B-Lymphoblastic Leukemia
GDSC
LPTPSST
DEG_SCF_FBW7_1
0.7078
p.T450I
ACH-000960
Leukemia
CCLE
LPTPSST
DEG_SCF_FBW7_1
0.7078
p.T450I
REH
haematopoietic_and_lymphoid_tissue
COSMIC
LPTPSST
DEG_SCF_FBW7_1
0.7078
p.F438L
TCGA-VS-A8Q8
CESC
TCGA
LPTPSST
DEG_SCF_FBW7_1
0.0556
p.F438L
DO51625
CESC
ICGC
LPTPSST
DEG_SCF_FBW7_1
0.0556
p.T454A
DO233663
GACA
ICGC
LPTPSST
DEG_SCF_FBW7_1
0.7139
p.S453I
DO229028
LICA
ICGC
LPTPSST
DEG_SCF_FBW7_1
0.623
p.P443L
DO220893
MELA
ICGC
LPTPSST
DEG_SCF_FBW7_1
0.1944
p.P461L
DO222662
MELA
ICGC
LPTPSST
DEG_SCF_FBW7_1
0.1389
p.P451L
DO222843
MELA
ICGC
LPTPSST
DEG_SCF_FBW7_1
0.7582
p.S453C
DO27887
ORCA
ICGC
LPTPSST
DEG_SCF_FBW7_1
0.643
p.P449H
ACH-000901
Lung Cancer
CCLE
LPTPSST
DEG_SCF_FBW7_1
0.6583
p.E442Q
ACH-001513
Cervical Cancer
CCLE
LPTPSST
DEG_SCF_FBW7_1
0.1667
Drug responses associated with NPAS4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IUM7
Neuronal PAS domain-containing protein 4
DEG_SCF_FBW7_1
448:454
LPTPSST
FBXW7
0.9774
More...