DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPTGS
Uniprot ID:
P13611
Source protein:
Versican core protein
Source gene:
VCAN
Class:
DEG_SCF_FBW7_1
Location:
423:429
E3 ligase:
FBXW7
DEGRON score:
0.9843
ASA_SCORE:
74.7857
COIL:
0.9337
CONS_SCORE:
0.3615
DSS_SCORE:
0.5672
HELIX:
0.0151
FCONS_SCORE:
0.9779
RIG_SCORE:
0.6477
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K431T
TCGA-D7-A4Z0
STAD
TCGA
LPTPTGS
DEG_SCF_FBW7_1
0.2778
p.K431T
DO47765
STAD
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.2778
p.K431N
TCGA-F5-6814
READ
TCGA
LPTPTGS
DEG_SCF_FBW7_1
0.2778
p.K431N
DO36556
READ
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.2778
p.L423S
TCGA-VQ-A8P5
STAD
TCGA
LPTPTGS
DEG_SCF_FBW7_1
0.7667
p.L423S
DO51763
STAD
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.7667
p.Q413K
DO48366
BLCA
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.0556
p.G428D
DO229005
COCA
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.6087
p.G428D
DO229505
LAML
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.6087
p.G428D
DO229047
LICA
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.6087
p.G428D
DO230550
LUSC
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.6087
p.D435N
DO222875
MELA
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.1667
p.P433F
DO222843
MELA
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.2222
p.A414V
DO228138
PBCA
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.0833
p.P433L
DO218908
SKCA
ICGC
LPTPTGS
DEG_SCF_FBW7_1
0.2222
p.T416A
SIDM00107
Melanoma
GDSC
LPTPTGS
DEG_SCF_FBW7_1
0.1389
p.T416A
SIDM00282
Colorectal Carcinoma
GDSC
LPTPTGS
DEG_SCF_FBW7_1
0.1389
p.T416A
ACH-000998
Colon/Colorectal Cancer
CCLE
LPTPTGS
DEG_SCF_FBW7_1
0.1389
p.T416A
CW-2
large_intestine
COSMIC
LPTPTGS
DEG_SCF_FBW7_1
0.1389
p.T416A
UACC-62
skin
COSMIC
LPTPTGS
DEG_SCF_FBW7_1
0.1389
p.I415V
SIDM00493
Other Solid Cancers
GDSC
LPTPTGS
DEG_SCF_FBW7_1
0.1111
p.T427A
SIDM01588
Endometrial Carcinoma
GDSC
LPTPTGS
DEG_SCF_FBW7_1
0.6028
p.T427A
ACH-000993
Endometrial/Uterine Cancer
CCLE
LPTPTGS
DEG_SCF_FBW7_1
0.6028
p.S415R
ACH-001081
Colon/Colorectal Cancer
CCLE
LPTPTGS
DEG_SCF_FBW7_1
0.1111
p.S415R
HCC2998
large_intestine
COSMIC
LPTPTGS
DEG_SCF_FBW7_1
0.1111
p.V418I
HOP-62
lung
COSMIC
LPTPTGS
DEG_SCF_FBW7_1
0.1944
p.T416I
RERF-LC-Sq1
lung
COSMIC
LPTPTGS
DEG_SCF_FBW7_1
0.1389
p.V430I
EFO-27
ovary
COSMIC
LPTPTGS
DEG_SCF_FBW7_1
0.3056
p.E437Q
NCI-H520
lung
COSMIC
LPTPTGS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with VCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPTGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SCF_FBW7_1
423:429
LPTPTGS
FBXW7
0.9843
More...