DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPVLT
Uniprot ID:
Q8TD26
Source protein:
Chromodomain-helicase-DNA-binding protein 6
Source gene:
CHD6
Class:
DEG_SCF_FBW7_1
Location:
2125:2131
E3 ligase:
FBXW7
DEGRON score:
0.9934
ASA_SCORE:
67.2429
COIL:
0.8609
CONS_SCORE:
0.3375
DSS_SCORE:
0.5636
HELIX:
0.0257
FCONS_SCORE:
0.9762
RIG_SCORE:
0.7038
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2115F
TCGA-CV-A6JM
HNSC
TCGA
LPTPVLT
DEG_SCF_FBW7_1
0.0556
p.S2115F
DO49991
HNSC
ICGC
LPTPVLT
DEG_SCF_FBW7_1
0.0556
p.R2137Q
DO228998
LICA
ICGC
LPTPVLT
DEG_SCF_FBW7_1
0.1667
p.Q2118K
DO229035
LICA
ICGC
LPTPVLT
DEG_SCF_FBW7_1
0.1389
p.P2128L
ACH-001556
Lung Cancer
CCLE
LPTPVLT
DEG_SCF_FBW7_1
0.7582
Drug responses associated with CHD6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPVLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TD26
Chromodomain-helicase-DNA-binding protein 6
DEG_SCF_FBW7_1
2125:2131
LPTPVLT
FBXW7
0.9934
More...