DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPVFPE
Uniprot ID:
Q8N9B5
Source protein:
Junction-mediating and -regulatory protein
Source gene:
JMY
Class:
LIG_APCC_ABBA_1
Location:
256:261
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7683
ASA_SCORE:
57.75
COIL:
0.9082
CONS_SCORE:
0.6202
DSS_SCORE:
0.2686
HELIX:
0.0317
FCONS_SCORE:
1.0511
RIG_SCORE:
0.771
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M266I
TCGA-D1-A1NY
UCEC
TCGA
LPVFPE
LIG_APCC_ABBA_1
0.1944
p.M266I
DO42512
UCEC
ICGC
LPVFPE
LIG_APCC_ABBA_1
0.1944
p.V248L
DO50318
ESAD
ICGC
LPVFPE
LIG_APCC_ABBA_1
0.1111
p.V258L
DO228974
LICA
ICGC
LPVFPE
LIG_APCC_ABBA_1
0.5654
p.E262K
DO222572
MELA
ICGC
LPVFPE
LIG_APCC_ABBA_1
0.3056
p.P254R
SIDM00614
Hepatocellular Carcinoma
GDSC
LPVFPE
LIG_APCC_ABBA_1
0.2778
p.P254R
ACH-000848
Liver Cancer
CCLE
LPVFPE
LIG_APCC_ABBA_1
0.2778
p.P254R
JHH-7
liver
COSMIC
LPVFPE
LIG_APCC_ABBA_1
0.2778
p.V258A
SIDM00590
Oral Cavity Carcinoma
GDSC
LPVFPE
LIG_APCC_ABBA_1
0.6936
p.V258A
SIDM00397
Acute Myeloid Leukemia
GDSC
LPVFPE
LIG_APCC_ABBA_1
0.6936
p.V258A
SIDM01378
Ovarian Carcinoma
GDSC
LPVFPE
LIG_APCC_ABBA_1
0.6936
p.V258A
Set2
haematopoietic_and_lymphoid_tissue
COSMIC
LPVFPE
LIG_APCC_ABBA_1
0.6936
p.V258A
HSC-2
upper_aerodigestive_tract
COSMIC
LPVFPE
LIG_APCC_ABBA_1
0.6936
p.P263H
SIDM01770
Gastric Carcinoma
GDSC
LPVFPE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with JMY mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPVFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N9B5
Junction-mediating and -regulatory protein
LIG_APCC_ABBA_1
256:261
LPVFPE
APC,CDC20,FZR1
0.7683
More...