DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LPVHGE
Uniprot ID:
Q96RG2
Source protein:
PAS domain-containing serine/threonine-protein kinase
Source gene:
PASK
Class:
LIG_APCC_ABBA_1
Location:
497:502
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9191
ASA_SCORE:
77.95
COIL:
0.7992
CONS_SCORE:
0.2864
DSS_SCORE:
0.6549
HELIX:
0.0695
FCONS_SCORE:
0.9691
RIG_SCORE:
0.6706
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G488V
TCGA-85-8350
LUSC
TCGA
LPVHGE
LIG_APCC_ABBA_1
0.0833
p.G488V
DO45492
LUSC
ICGC
LPVHGE
LIG_APCC_ABBA_1
0.0833
p.P506H
DO230311
COCA
ICGC
LPVHGE
LIG_APCC_ABBA_1
0.2222
p.Q510K
DO228952
LICA
ICGC
LPVHGE
LIG_APCC_ABBA_1
0.1111
p.Q510K
DO229041
LICA
ICGC
LPVHGE
LIG_APCC_ABBA_1
0.1111
p.Q503E
DO52686
MALY
ICGC
LPVHGE
LIG_APCC_ABBA_1
0.3056
p.T512A
SIDM00263
Ewing's Sarcoma
GDSC
LPVHGE
LIG_APCC_ABBA_1
0.0556
p.T512A
SIDM00014
Colorectal Carcinoma
GDSC
LPVHGE
LIG_APCC_ABBA_1
0.0556
p.T512A
SIDM00179
Melanoma
GDSC
LPVHGE
LIG_APCC_ABBA_1
0.0556
p.P487S
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
LPVHGE
LIG_APCC_ABBA_1
0.0556
p.P487S
ACH-000878
Lung Cancer
CCLE
LPVHGE
LIG_APCC_ABBA_1
0.0556
p.P487S
HCC-15
lung
COSMIC
LPVHGE
LIG_APCC_ABBA_1
0.0556
p.D508G
SIDM00083
Glioblastoma
GDSC
LPVHGE
LIG_APCC_ABBA_1
0.1667
p.D508G
ACH-000273
Brain Cancer
CCLE
LPVHGE
LIG_APCC_ABBA_1
0.1667
p.D508G
SF539
central_nervous_system
COSMIC
LPVHGE
LIG_APCC_ABBA_1
0.1667
p.P506T
ACH-000509
Lymphoma
CCLE
LPVHGE
LIG_APCC_ABBA_1
0.2222
p.S496G
ACH-000900
Lung Cancer
CCLE
LPVHGE
LIG_APCC_ABBA_1
0.3056
p.S496G
NCI-H23
lung
COSMIC
LPVHGE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with PASK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPVHGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96RG2
PAS domain-containing serine/threonine-protein kinase
LIG_APCC_ABBA_1
497:502
LPVHGE
APC,CDC20,FZR1
0.9191
More...