DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPVHQD
Uniprot ID:
Q6P3R8
Source protein:
Serine/threonine-protein kinase Nek5
Source gene:
NEK5
Class:
LIG_APCC_ABBA_1
Location:
510:515
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7725
ASA_SCORE:
98.55
COIL:
0.8733
CONS_SCORE:
0.4098
DSS_SCORE:
0.5017
HELIX:
0.102
FCONS_SCORE:
1.0108
RIG_SCORE:
0.7085
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V523L
TCGA-22-4613
LUSC
TCGA
LPVHQD
LIG_APCC_ABBA_1
0.1111
p.V523L
DO26468
LUSC
ICGC
LPVHQD
LIG_APCC_ABBA_1
0.1111
p.K507N
TCGA-DR-A0ZM
CESC
TCGA
LPVHQD
LIG_APCC_ABBA_1
0.3611
p.K507N
DO6254
CESC
ICGC
LPVHQD
LIG_APCC_ABBA_1
0.3611
p.P511S
TCGA-IB-7651
PAAD
TCGA
LPVHQD
LIG_APCC_ABBA_1
0.5641
p.P511S
DO46657
PAAD
ICGC
LPVHQD
LIG_APCC_ABBA_1
0.5641
p.K507R
DO232224
PBCA
ICGC
LPVHQD
LIG_APCC_ABBA_1
0.3611
p.H513Y
DO229453
SKCA
ICGC
LPVHQD
LIG_APCC_ABBA_1
0.6118
p.T502S
SIDM00444
Esophageal Carcinoma
GDSC
LPVHQD
LIG_APCC_ABBA_1
0.1111
p.T502S
ACH-001368
Esophageal Cancer
CCLE
LPVHQD
LIG_APCC_ABBA_1
0.1111
p.T502S
OACM5-1
oesophagus
COSMIC
LPVHQD
LIG_APCC_ABBA_1
0.1111
p.D515N
SIDM00596
Endometrial Carcinoma
GDSC
LPVHQD
LIG_APCC_ABBA_1
0.6932
p.D515N
SIDM00306
Non-Small Cell Lung Carcinoma
GDSC
LPVHQD
LIG_APCC_ABBA_1
0.6932
p.D515N
ACH-000635
Ovarian Cancer
CCLE
LPVHQD
LIG_APCC_ABBA_1
0.6932
p.D515N
ACH-000672
Lung Cancer
CCLE
LPVHQD
LIG_APCC_ABBA_1
0.6932
p.D515N
ACH-000941
Endometrial/Uterine Cancer
CCLE
LPVHQD
LIG_APCC_ABBA_1
0.6932
p.D515N
ACH-000954
Endometrial/Uterine Cancer
CCLE
LPVHQD
LIG_APCC_ABBA_1
0.6932
p.D515N
ACH-001517
Endometrial/Uterine Cancer
CCLE
LPVHQD
LIG_APCC_ABBA_1
0.6932
p.D515N
ACH-001856
Bile Duct Cancer
CCLE
LPVHQD
LIG_APCC_ABBA_1
0.6932
p.D515N
IA-LM
lung
COSMIC
LPVHQD
LIG_APCC_ABBA_1
0.6932
p.D515N
HEC-1
endometrium
COSMIC
LPVHQD
LIG_APCC_ABBA_1
0.6932
p.T502P
ACH-001091
Colon/Colorectal Cancer
CCLE
LPVHQD
LIG_APCC_ABBA_1
0.1111
Drug responses associated with NEK5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPVHQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6P3R8
Serine/threonine-protein kinase Nek5
LIG_APCC_ABBA_1
510:515
LPVHQD
APC,CDC20,FZR1
0.7725
More...