DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPVHYE
Uniprot ID:
Q8NDT2
Source protein:
Putative RNA-binding protein 15B
Source gene:
RBM15B
Class:
LIG_APCC_ABBA_1
Location:
506:511
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9917
ASA_SCORE:
61.7
COIL:
0.697
CONS_SCORE:
0.2569
DSS_SCORE:
0.4931
HELIX:
0.1333
FCONS_SCORE:
0.8749
RIG_SCORE:
0.765
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R521S
TCGA-09-2044
OV
TCGA
LPVHYE
LIG_APCC_ABBA_1
0.0556
p.R521S
DO28923
OV
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.0556
p.Q502E
TCGA-23-2645
OV
TCGA
LPVHYE
LIG_APCC_ABBA_1
0.2222
p.Q502E
DO30890
OV
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.2222
p.R519W
TCGA-2W-A8YY
CESC
TCGA
LPVHYE
LIG_APCC_ABBA_1
0.1111
p.R519W
DO223732
CESC
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.1111
p.R519W
SIDM01085
Bladder Carcinoma
GDSC
LPVHYE
LIG_APCC_ABBA_1
0.1111
p.R519W
ACH-000242
Bladder Cancer
CCLE
LPVHYE
LIG_APCC_ABBA_1
0.1111
p.R519W
RT4
urinary_tract
COSMIC
LPVHYE
LIG_APCC_ABBA_1
0.1111
p.S504L
TCGA-AX-A0J0
UCEC
TCGA
LPVHYE
LIG_APCC_ABBA_1
0.7222
p.S504L
DO41133
UCEC
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.7222
p.P503L
TCGA-BF-AAP2
SKCM
TCGA
LPVHYE
LIG_APCC_ABBA_1
0.25
p.P503L
DO219466
SKCM
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.25
p.P498S
TCGA-EE-A2A5
SKCM
TCGA
LPVHYE
LIG_APCC_ABBA_1
0.1111
p.P498S
DO37941
SKCM
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.1111
p.D515N
TCGA-EE-A3J5
SKCM
TCGA
LPVHYE
LIG_APCC_ABBA_1
0.2222
p.D515N
DO47331
SKCM
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.2222
p.R496W
TCGA-EY-A1GI
UCEC
TCGA
LPVHYE
LIG_APCC_ABBA_1
0.0556
p.R496W
DO41211
UCEC
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.0556
p.H509D
TCGA-KU-A66S
HNSC
TCGA
LPVHYE
LIG_APCC_ABBA_1
0.7688
p.H509D
DO44456
HNSC
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.7688
p.R519G
TCGA-Y8-A8RZ
KIRP
TCGA
LPVHYE
LIG_APCC_ABBA_1
0.1111
p.R519G
DO49807
KIRP
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.1111
p.R521H
DO233764
GACA
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.0556
p.R521H
SIDM00217
Colorectal Carcinoma
GDSC
LPVHYE
LIG_APCC_ABBA_1
0.0556
p.R521H
ACH-000999
Colon/Colorectal Cancer
CCLE
LPVHYE
LIG_APCC_ABBA_1
0.0556
p.R521H
SNU-1040
large_intestine
COSMIC
LPVHYE
LIG_APCC_ABBA_1
0.0556
p.Y517C
DO35442
PACA
ICGC
LPVHYE
LIG_APCC_ABBA_1
0.6111
p.G516E
SIDM00190
Melanoma
GDSC
LPVHYE
LIG_APCC_ABBA_1
0.1944
p.G516E
ACH-002097
Skin Cancer
CCLE
LPVHYE
LIG_APCC_ABBA_1
0.1944
p.G516E
CP66-MEL
skin
COSMIC
LPVHYE
LIG_APCC_ABBA_1
0.1944
p.Q500R
SIDM00487
Colorectal Carcinoma
GDSC
LPVHYE
LIG_APCC_ABBA_1
0.1667
p.Q500R
ACH-000963
Colon/Colorectal Cancer
CCLE
LPVHYE
LIG_APCC_ABBA_1
0.1667
p.Q500R
CCK-81
large_intestine
COSMIC
LPVHYE
LIG_APCC_ABBA_1
0.1667
Drug responses associated with RBM15B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPVHYE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NDT2
Putative RNA-binding protein 15B
LIG_APCC_ABBA_1
506:511
LPVHYE
APC,CDC20,FZR1
0.9917
More...