DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPVTPQKE
Uniprot ID:
Q9BWH6
Source protein:
RNA polymerase II-associated protein 1
Source gene:
RPAP1
Class:
DEG_SCF_FBW7_2
Location:
318:325
E3 ligase:
FBXW7
DEGRON score:
0.5991
ASA_SCORE:
84.45
COIL:
0.7435
CONS_SCORE:
0.3319
DSS_SCORE:
0.4358
HELIX:
0.191
FCONS_SCORE:
0.9345
RIG_SCORE:
0.7385
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P322S
TCGA-97-7554
LUAD
TCGA
LPVTPQKE
DEG_SCF_FBW7_2
0.6752
p.P322S
DO23592
LUAD
ICGC
LPVTPQKE
DEG_SCF_FBW7_2
0.6752
p.A317S
TCGA-AX-A06F
UCEC
TCGA
LPVTPQKE
DEG_SCF_FBW7_2
0.3056
p.A317S
DO41752
UCEC
ICGC
LPVTPQKE
DEG_SCF_FBW7_2
0.3056
p.A317E
TCGA-IN-A6RL
STAD
TCGA
LPVTPQKE
DEG_SCF_FBW7_2
0.3056
p.A317E
DO51738
STAD
ICGC
LPVTPQKE
DEG_SCF_FBW7_2
0.3056
p.V320M
DO230334
COCA
ICGC
LPVTPQKE
DEG_SCF_FBW7_2
0.6097
p.V320M
DO230990
LUSC
ICGC
LPVTPQKE
DEG_SCF_FBW7_2
0.6097
p.L327M
DO228948
LICA
ICGC
LPVTPQKE
DEG_SCF_FBW7_2
0.2778
p.D330G
DO232858
NACA
ICGC
LPVTPQKE
DEG_SCF_FBW7_2
0.1944
p.E310K
SIDM00024
Non-Cancerous
GDSC
LPVTPQKE
DEG_SCF_FBW7_2
0.1111
p.E310K
SIDM00164
Biliary Tract Carcinoma
GDSC
LPVTPQKE
DEG_SCF_FBW7_2
0.1111
Drug responses associated with RPAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPVTPQKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BWH6
RNA polymerase II-associated protein 1
DEG_SCF_FBW7_2
318:325
LPVTPQKE
FBXW7
0.5991
More...