DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPVYPD
Uniprot ID:
Q8NG31
Source protein:
Kinetochore scaffold 1
Source gene:
KNL1
Class:
LIG_APCC_ABBA_1
Location:
1742:1747
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9774
ASA_SCORE:
74.8167
COIL:
0.7735
CONS_SCORE:
0.4705
DSS_SCORE:
0.4847
HELIX:
0.2003
FCONS_SCORE:
1.1432
RIG_SCORE:
0.7694
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1743L
SIDM00282
Colorectal Carcinoma
GDSC
LPVYPD
LIG_APCC_ABBA_1
0.6471
p.P1743L
CW-2
large_intestine
COSMIC
LPVYPD
LIG_APCC_ABBA_1
0.6471
p.E1745A
RKO
large_intestine
COSMIC
LPVYPD
LIG_APCC_ABBA_1
0.7701
p.R1741T
DU-145
prostate
COSMIC
LPVYPD
LIG_APCC_ABBA_1
0.3056
Drug responses associated with KNL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPVYPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NG31
Kinetochore scaffold 1
LIG_APCC_ABBA_1
1742:1747
LPVYPD
APC,CDC20,FZR1
0.9774
More...